KEGG   Castanea sativa (European chestnut): 142613791
Entry
142613791         CDS       T11266                                 
Name
(RefSeq) DNA mismatch repair protein PMS1
  KO
K10858  DNA mismatch repair protein PMS2
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa03430  Mismatch repair
csaa03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    142613791
   03460 Fanconi anemia pathway
    142613791
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csaa03400]
    142613791
DNA repair and recombination proteins [BR:csaa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     142613791
SSDB
Motif
Pfam: DNA_mis_repair MutL_C HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 142613791
NCBI-ProteinID: XP_075642408
LinkDB
Position
10:complement(26816424..26825804)
AA seq 921 aa
MEAADSPSPTAIKPINKGVVHRICAGQVIIDLSSAVKELVENSLDAGATSVEISLKDYGQ
DFFQVIDNGCGISPSNFKVLALKHHTSKLLDFPDLQSLTTFGFRGEALSSLCALGNLTVE
TRTKNESVATHLTYDHSGLLVAEKKTARQIGTTVTVKKLFSNLPVRSKEFSRNIRKEYGK
LISLLNAYALIAKGVRLVCANTTGKNAKSVVLKTQGTGSLKDNIITVFGMNIFNCLEPMN
IFISDSCKVDGFLSRFGHGSGRNLGDRQYFFVNGRPVDMPKVGKLVNELYKGANSRQYPI
AIMNFTVPTRECDVNVTPDKRKIFFSDESSILSALREGLQKIYSPSYAFYPVNKVEECTK
EADCSELCSPREKSHMLKQLSPDGSDLEVIEEHVTEDGIHLKTVENAQQLVHDQEGSIHT
NNGKFMEKDFTLRVHGTKKADSSRKLTGHLHSVTTDQIASSPSRADGNGIAANTDSCGRS
SYVQSSLNKFVTVNKRKHERISTTLSELPILRNQTLSCHLKNDDSERHAAVSRSPASHDL
VDNTAVVNKNEPSKYLRADTILNKFRIPLSSGGNPKDGEPGKEPEGQEKAAPSSNMAPIA
SSSKDLENKLQDPSVASPSRSSTSILDAPKSPADLELCSTLQFSFQELKTKRQQRLSILQ
SSGHKDGRAKMKRCYDAATLELSQPDNEERKAKALAAATKELEKLFRKEDFGRMKVIGQF
NLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTIFNQQPLLRPLGLELSTEEEVVASMH
IDVIRKNGFTLEEDPHAPPGQRFKLKAVPFSKNITFGIEDVKDLISTLADSEGECSMIGS
YKMDTFDSVCPSRVRAMLASRACRSSIMIGDALDRNEMQKILKHLADLKSPWNCPHGRPT
MRHLTDLTSIHKRSEGKNVDC
NT seq 2766 nt   +upstreamnt  +downstreamnt
atggaagcagccgattctccatccccaaccgctatcaaacccataaacaaaggtgtggtt
cacagaatttgcgcaggccaagtgatcattgacctctcgtcggccgtgaaggaactcgtc
gagaacagcctcgacgccggcgccaccagcgtcgagatctctctcaaagactacggccag
gacttcttccaggttatcgacaatggctgcggcatttcccccagtaacttcaaggttctt
gcacttaagcatcatacgtcgaaattattggattttcctgatctccagtcactgaccaca
tttggcttcagaggggaggcattgagttcactttgtgctttggggaatctgactgttgag
actaggacaaagaatgagtcagttgctacacatttaacttatgaccattcaggtttactg
gtagctgaaaagaaaacagcacgccaaattggtaccacggtcactgttaagaagttgttc
tccaatttacctgtgagaagcaaagaatttagtcgcaacattcgcaaggaatatggaaag
cttatttcgttattgaatgcctatgccttaattgcaaaaggagttcggttagtctgcgcc
aacacaactgggaaaaatgcgaagtctgtggtacttaaaacacaaggaactggttctctt
aaagataacatcattacagtgtttggcatgaacatcttcaactgcttagagcctatgaat
atatttatatcagacagttgcaaagttgatggcttcctttccaggtttggacatggtagt
ggacgcaacttgggagacagacaatacttttttgttaatggtcgaccagtggatatgcct
aaagttggcaagctggtgaatgaattatataaaggtgcaaactcccggcaatatccgatt
gcaatcatgaacttcactgttccaacaagagaatgtgatgttaatgtaactcctgataaa
aggaaaatatttttttctgatgaaagctccatattgtctgccctaagggagggtttacag
aagatatattccccaagttatgctttttatcctgttaataaagttgaggagtgcactaag
gaagcagattgctctgaattgtgctctccacgtgagaaatctcatatgttgaaacaatta
tctccagatggcagtgatctagaagttattgaggagcatgttacagaggatggaattcat
ctcaaaacagttgaaaatgctcagcagctagtgcatgatcaagaaggatcaatccacacc
aataatggcaaattcatggagaaagatttcactcttagagtacatggcactaaaaaggct
gacagcagtaggaaattgactggtcacctccatagtgttacaactgatcaaattgcttcc
tccccttcacgagcggatgggaatggaattgctgctaatacagattcatgtggtcgttca
agctatgtccaatcatcgcttaacaaatttgtaactgtcaataaaagaaagcatgaaaga
attagtacaacactatctgaactgcctatccttagaaatcaaaccctttcttgtcatttg
aagaatgatgattctgaaaggcatgctgctgtttcaagatccccagcgagtcatgacctg
gttgataatactgctgtggtgaacaagaatgagccttccaagtatcttagagcagatacg
attttaaataaatttagaattccactttcttctggaggcaatcctaaagatggagaacct
ggaaaggaaccagagggtcaagagaaagcagccccttcttctaacatggcaccaattgcg
tcttctagcaaggatctcgaaaataaattacaagatccttctgttgcgtctccttcacgt
tcttctacatccatattagatgctccaaagtcacctgctgatctagagttgtgttccacc
ctgcaatttagttttcaagagttgaagacaaagcggcagcagaggctgtctattttacaa
tctagtggtcataaagatggaagagcaaagatgaaaaggtgctatgacgctgcaactctg
gagctttctcaacctgataatgaggaacgaaaggcaaaggctttagctgcagctactaaa
gagttggaaaaactattcagaaaggaggactttggcagaatgaaggtgattgggcaattt
aaccttggttttataattgggaagttggatcaagatttatttatcgtggatcagcatgct
gctgatgagaaatacaattttgagcgtctttctcaatcaaccatttttaaccaacagcct
ttgctccggccattggggttggagttatctactgaagaagaggtggttgcttcaatgcac
attgacgtaattaggaaaaatggcttcactctggaagaggatccacatgctccacctggg
cagcgttttaaattgaaagctgtccccttcagtaaaaacattacttttggaatcgaagat
gtcaaggacctgatttctactctagctgatagtgaaggggaatgctcaatgattgggagt
tacaaaatggatacttttgactctgtttgcccaagcagagttcgtgcaatgctggcatca
cgtgcgtgcagatcatctattatgattggagatgcacttgacagaaatgagatgcagaag
atactcaagcatttggcagacctgaaatctccttggaattgcccgcatggtaggccaacc
atgcgtcatttgactgacctgacatccattcacaaaagatcagaaggaaaaaatgtggac
tgttaa

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