Castanea sativa (European chestnut): 142613828
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Entry
142613828 CDS
T11266
Name
(RefSeq) sister-chromatid cohesion protein 3
KO
K06671
cohesin complex subunit SA-1/2
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csaa03036
]
142613828
Chromosome and associated proteins [BR:
csaa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
142613828
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Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
SCD
STAG
PDS5
HEAT_2
Motif
Other DBs
NCBI-GeneID:
142613828
NCBI-ProteinID:
XP_075642454
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Position
10:complement(21748779..21759771)
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AA seq
1145 aa
AA seq
DB search
MENLAPPSETSTRPPKRPRAHQGVTENQTGKANGDRAGEANESVDRESSPEDFEELRPKS
KRSRASEGTSASAHKANDLSLIEVVKGNGKFIPQVVKLWVERYEKAPKPTMVELLMMLFE
ACGAKYHIKEEFLDETDVDDVVVALVNLARTGEVEDYQNSKRKELKNFKDNLESFWDNIV
HECQHGPLFDQVLFDKCMDYIIALSCTPPRIYRQVASLMGLRLVTSFIAVTKMLSAQRET
TRRQLDAEKKKRTEGPRLESLNKRFSTTHEQITVLEEMMRKIFTGLFVHRYRDIDPNIRT
SCIQSLGSWILSYPSLFLQDLYLKYLGWTLNDKNAGVRRASILALQNLYEADDNVPTLSL
FTERFSNRMIELADDIDVSVAVCAIGLVKQLLRHQLIPDDDLGPLYDLLIDDPPEIRHAI
GALVYDHLIAQKFNTSQSGTKGDSSASSEVHLGRMLQILREFSTDPILSIYVIDDVWEYM
KAMKDWKCIISMLLDENPLIELTDDDATNLVRLLCASVKKAVGERIVPATDNRKQYYTKA
QKEVFENNRKDVTVAMMKNYPLLLRKFMADKGKAPSLVEIILHTNLELYSLKRQEQNFRS
VLQLIKEAFFKHGEKEALRSCVKAINFCSTESQGELQDFARSELKELEDGLIAKLKAAIK
EVVDGGDEYSLLVNLKRLYELQLSRAVPIESLYEEIVMVLSSFRNMEDEVVSFLLLNMYL
HLAWCLHSIVNSETVTEASLSSLLSKRNTFFEQLDYFLNNFSEVEEMSKHGNQLACRVCT
ILAEAWFLFRKTNYTSTKLERLGYCPDASILQRFWKLCEQQLNISDETEDEDVNKEYIEE
TNRDAVMIAAAKLVAGDAVPKEYLGPEIISHFVMHGTGVAEIVKHLITVLKKKDADLSNI
FLEALKRAYRRHVVELSKSDEEPLTSRSFVECKDLATRLSGTFMGAARNKHRSDILKIVK
DGIDYAFVDAPKQLSFLEGAVLHFVSKLPTPDVLDIVKDVQNRTENVNTDEDPSGWRPYY
TFVDSLREKYAKNEGLQDEKEGVSVRRRGRPRKRRNIEGKRLFDEHNSSEDEDSISAYDQ
EDAQDEEEKQDEEEEEDAPLINSIRSSKLRSLRLSREENKGQTRTGDSERAADNLAASRT
SGASS
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggagaatctagctccaccttccgagacctcaacgcgtcctcccaaaagacctagggct
catcagggtgtcactgagaaccagaccggtaaggccaacggcgaccgggccggcgaagca
aatgagtccgtggaccgggagagttcgcccgaagatttcgaagagcttcgtcctaagtct
aagcggagtcgtgcctctgaaggaacttcggcctcggctcacaaagccaacgacctcagc
ttgattgaggtcgtcaagggcaatgggaaatttattcctcaagtggtcaagctttgggtt
gagcgatatgaaaaggctccaaaacctacaatggttgaactcctgatgatgctctttgag
gcatgtggagctaagtatcatatcaaggaagagttcctggatgagacagatgttgatgat
gttgtggttgctcttgtgaatcttgctagaacaggagaagttgaggattatcaaaattca
aaaaggaaggagttaaagaacttcaaagataatcttgaatcattctgggacaatatagtt
catgagtgtcaacatggaccattatttgatcaggttttgttcgacaagtgtatggactat
ataattgcactatcttgtactcctccaagaatttaccgtcaagttgcttccttgatgggc
ctccgacttgtcacatccttcatagctgttactaaaatgctcagtgcacagcgtgaaact
actcgtagacagttggatgctgaaaagaagaaacgaactgagggtcctcgtctggagtca
ctaaataaaaggttctcaacaactcatgaacagataacagtattggaggagatgatgcgc
aaaatatttactgggttatttgtccaccgttatcgagacattgacccaaacattcgaacg
tcatgcatacagtcacttggttcatggattttatcatatccttctctgttcttacaggat
ttgtacttgaagtatcttgggtggacactgaatgacaaaaatgctggtgttagaagagct
tcgatccttgcattgcaaaatctttatgaggcagatgataatgtgccaactcttagttta
tttactgaaagattttctaaccggatgattgagcttgctgatgacattgatgtttctgtg
gctgtgtgtgccataggacttgtaaaacaactactaagacatcagcttatacccgatgat
gacttgggtcctttatatgatttattgattgacgatccaccagaaatcaggcatgctata
ggagcattagtttatgatcacctgattgctcaaaagtttaacacctcccagtctggcaca
aaaggcgacagcagcgcttcttcagaggtccatcttggcagaatgttgcaaatactaaga
gagttttcaactgatcctattttaagtatctatgtcattgatgatgtttgggaatacatg
aaggctatgaaggattggaagtgtattatctccatgctcttagatgagaatccattgatt
gagcttactgatgatgatgcaacaaacttggtacggcttctgtgtgcttctgtcaaaaag
gcagttggagagaggattgtacctgctactgataatcgcaagcagtattacactaaagct
caaaaagaagtatttgaaaacaacagaaaggatgtcactgttgccatgatgaagaactat
ccattgctcttgcgcaaattcatggcagacaaagggaaagcgccatcattagttgagatt
attttgcatactaaccttgagctttattccttgaagaggcaggagcagaattttagaagt
gtccttcagcttataaaagaggctttttttaagcatggtgagaaggaggcactgagatcc
tgtgtgaaggctataaacttttgttccactgagagtcaaggggagctgcaggattttgcc
cgtagtgaattaaaagaacttgaagatggacttattgctaagcttaaagctgcaattaaa
gaagttgtggatggtggtgatgagtattctcttcttgtaaatttgaaaaggttgtatgag
cttcaattgtcaagggctgtgccaattgagagtttatacgaagaaattgtcatggtcctc
agtagttttagaaatatggaagatgaggtcgtcagttttcttcttctgaacatgtatttg
catttggcgtggtgtctgcactccattgtaaatagtgaaactgtgactgaagcatcttta
tcttcactactatctaagcgcaacacgttttttgagcaacttgattactttcttaacaac
ttttctgaagtggaggaaatgagtaaacatggaaatcaactagcttgcagggtttgtact
atacttgccgaagcatggtttttgttcagaaagacgaattatacttcaacaaagctggaa
agattaggatattgtccagatgcatctattcttcaaaggttctggaaactttgtgaacag
cagctcaatatttcagatgagacagaagatgaagatgtgaataaagagtatattgaggag
acaaatagagatgcagtcatgattgctgctgcaaagttggttgctggcgatgcagttccg
aaggagtatcttggtccagagattatttctcatttcgtaatgcatggaacgggtgtggca
gagattgttaagcatctgatcactgtgctaaagaaaaaagatgctgacctttccaatatc
ttcttagaagcgctgaaaagggcctaccgtcggcatgttgtagaactttccaaaagtgat
gaggaacccttgactagcaggtctttcgtagaatgtaaagatcttgctactcggctttct
ggaactttcatgggtgctgctcggaacaagcataggtcagacatcttaaaaattgtcaag
gatggtattgattatgcttttgtagatgctccaaagcagttgtcattcttggaaggcgct
gtgctccattttgtatcaaaacttcccacacctgatgtgcttgacattgtaaaggatgtt
caaaatcgtacggagaatgtaaatacagacgaagatccaagtggctggcgcccctattac
acatttgttgacagcttacgtgagaagtatgcaaagaatgaaggtttacaagacgagaaa
gaaggggtatctgtcaggcgcaggggtcgtcctcgtaagcggcgtaatatagagggaaag
agactttttgatgagcacaattcaagtgaagacgaggattctatcagtgcttatgaccaa
gaagacgctcaagatgaagaagagaagcaagatgaggaggaagaggaagatgcccctttg
ataaattcaattaggtcatccaagttgaggtcactgaggctttcaagagaggaaaacaaa
ggccagacaaggacaggagattcagaaagagctgcagataatttagctgcatcaagaaca
tcaggggcctccagctag
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