Castanea sativa (European chestnut): 142613997
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Entry
142613997 CDS
T11266
Name
(RefSeq) uncharacterized protein LOC142613997
KO
K11096
small nuclear ribonucleoprotein D2
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142613997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csaa03041
]
142613997
03032 DNA replication proteins [BR:
csaa03032
]
142613997
Spliceosome [BR:
csaa03041
]
Complex A
U1 snRNP components
Sm proteins
142613997
U2 snRNP components
142613997
Complex B
U1 snRNP components
142613997
U4/U6.U5 tri-snRNP components
142613997
Complex C
U2 snRNP components
142613997
DNA replication proteins [BR:
csaa03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
142613997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
142613997
NCBI-ProteinID:
XP_075642639
LinkDB
All DBs
Position
10:complement(25789027..25792064)
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AA seq
154 aa
AA seq
DB search
MQLSPLSFSLYPYRQRQLEKFPKTLTLTLTLIAGFFLVENHIIINMSKPMDEDTTGGKNE
EEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKT
GKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgtcaccactgtctttctctctatacccctatcgacaaagacaattggagaag
ttccctaaaaccctaaccctaaccctaaccctaatcgctggttttttcctggtagagaat
cacattatcatcaacatgagtaagccaatggatgaggataccactggaggcaagaatgag
gaagaggaattcaacactgggccactctctgttctgatgatgagtgttaagaataacaca
caggtgctcattaactgccgaaacaacaagaagcttctaggtcgtgtgagggcatttgat
cgtcactgtaacatggttcttgaaaatgtcagggagatgtggactgaggtaccaaagact
ggtaaaggcaagaagaaagctcaacctgtcaacaaagataggtttatcagtaagatgttt
cttcggggagactctgttatcatcgttcttaggaatccgaagtga
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