KEGG   Castanea sativa (European chestnut): 142614560
Entry
142614560         CDS       T11266                                 
Name
(RefSeq) splicing factor U2af small subunit A
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    142614560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csaa03041]
    142614560
Spliceosome [BR:csaa03041]
 Complex A
  U2 snRNP components
   U2 related factors
    142614560
 Complex B
    142614560
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_DUS3L RBD_AKAP-17A zf-CCCH_4
Other DBs
NCBI-GeneID: 142614560
NCBI-ProteinID: XP_075643213
LinkDB
Position
1:complement(16233618..16237598)
AA seq 283 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
GVDAQGQTIDPRKIQEHFEDFYEDIFEELSKFGEIESLNVCDNLADHMIGNVYVQFKEED
QAASALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGREL
RRKLFGRYRGYRVSRSRSRSSSPQRHRRDHDRRERDSRDRDYRGNGRSSKDRYDRHDRGD
RHERDGSKRRYGSPKRSRSPVRDGSEERRARIEQWNREREERE
NT seq 852 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcttcgatcttcggcaccgagaaggaccgagtgaattgcccattc
tacttcaagatcggcgcgtgtcgccacggcgatcgctgctctcgcctccacaaccgaccg
acgatctctccgaccttgcttttatcgaacatgtaccaacgacccgacatgatcacgccg
ggcgtggacgctcagggtcaaaccattgacccgcgcaagatccaagagcacttcgaggat
ttctacgaggacatcttcgaggaactcagcaagttcggcgagatcgagagcctcaacgtt
tgcgacaacctcgccgaccacatgatcggcaacgtttacgttcagttcaaggaggaagac
caagccgcctcggctttacaggccttacagggccggttctattcgggtcgacccattatc
gccgatttctcgccagtgaccgattttcgcgaagccacgtgtcggcaattcgaggagaat
aactgtaaccgaggtgggtactgcaatttcatgcacgtgaagctgattggaagagaattg
aggaggaagctgtttgggaggtaccgtgggtatagggtgagccggagccggagccggagt
tcgagcccgcagcggcaccggagggatcacgataggcgtgagagggattctcgggaccgt
gattatcgcggaaacgggcgatccagcaaggacaggtatgataggcatgatagaggtgat
aggcatgagagagatgggtctaagagaagatatgggagtcctaagcggagcaggagtcct
gttagggacgggagcgaggagcgccgagctagaattgagcagtggaatcgagaaagggag
gagagggagtga

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