Castanea sativa (European chestnut): 142614867
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Entry
142614867 CDS
T11266
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 1
KO
K03255
protein TIF31
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
csaa03012
]
142614867
Translation factors [BR:
csaa03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
142614867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_10
TPR_12
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_MalT
TPR_9
TPR_1
TPR_8
ZMYND8_CC
RsiG
Motif
Other DBs
NCBI-GeneID:
142614867
NCBI-ProteinID:
XP_075643626
LinkDB
All DBs
Position
11:26409350..26438859
Genome browser
AA seq
1849 aa
AA seq
DB search
MSPRNSRGRAKGEKKKKEDKVLPIVMDITVNLPDETCVLLKGISTDRIIDVRRLLSVRTE
TCNITNFSLSHEVRGPHLKDTVDVSALKPCVLTLVEEEYDEEEAAVSHVRRVLDIVACTT
SFGAWGSKNSPKSDENANNKSKSDEEEETTRHSCPKLGTFYHFFSLSHLTPPLQFIRRAT
TRQHVDEINSAAGHHLFSFDVKLCNGKLVHVEACRKGFYSLGKQRTLTHNLVDLLRQLSR
AFDNAYNDLMKAFSERNKFGNLPYGFRANTWLVPPVAAQLPSVFPPLPVEDETWGGNGGG
LGRDGKSDLIPWANEFLFLASMPCKTTEERQVRDRKAFLLHSLFVDVAIFRAVKAVQHVM
EQPDLICSVSNGEILYMERVGDLSIIVMKDVSNASCKLDTKIDGIQATGVDEKNLAERNL
LKGITADENTAAHDIATLGAINLRYCGYIATVKVEQRENVKSSNPSQSIELLDQPDGGAN
SLNINSLRLLLHKTPPPEYYKPAPHMQSLEHEEINASRSFVEGLLEKSLAKLEENELGLD
HVLRWELGACWIQHLQDQKNTGKDKKPSGENAKNEMKVEGLGTNLRSLRNNRKKTDGSNL
KGQFENSRLNAEGVIGEAEHSILPSIESQLETNAKENELAMKRVLSEAAFARLKETETGL
HCKSFQELIDLSQKYYTEVALPKLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLGHVVK
LSEKLPHVQSLCIHEMIVRAFKHILLAVIAAVDNTEKMAVSIAAALNMMLGVLENEESNK
SCNVHSLVWRWLQVFLKKRFEWDLSSLNYKDIRKFAILRGLCHKVGIELVPRDFDMDSLN
PFRKSDIVSLVPVHKQAACSSADGRQLLESSKTALDKGKLEDAVSYGTKALTKLVAVCGP
YHRMTAGAYSLLAVVLYHTGDFNQATVYQQKALDINERELGLDHPDTMKSYGDLAVFYYR
LQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCN
QRLLGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWL
EYFESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPNNDAKGRDGAVRRKSYIA
KVKGTSHQDLSPQSSDETTKEEISDEETPIPETEVSADADQEISSVTVESQQSVMEKTVE
ENPNIAHEIFSETHAEGEDGWQPVQRPRSAGSYGRRLKQRRATIGRVYSYPKKNVDTDIE
YSPVKNPHKTSKYYLLKKRTTSHGSYTDHQTLNPAQGTKFGRRMVKTVTYRVKSMPSSTK
TATTETPRNSGELFSSPLSCPNSAPNDVGPVKNSIVSLGKSPSYKEVALAPPGTIGKLQI
WVPQSDFVDNRELDSGKHEEEMNEVKGNDKLIRTEMESIVEEEKKNSIPNSTDHLKEEIV
VVKEKEDTQLTDAMEDNPSLVASESVERLESGRVEVQELVETGIIDGMPNGIDSLKREVS
EKDSSTSSETQQNSQSTCQGVEDLQEKPLILNSSDVRGYPNKKLSAAAAPFNPSPVITRP
AIAMNITLPSGPGAVPAIAPWPVNINVHRGPAVLPTVNPICSSPHHPYLSPPPTPNMIQA
LPFVYPPYTQSQAVPTSTFPVTSSGFHPNHFTWQCNVNPNVSEFIPGTVWTGCRPVEYSV
PQPVVEPISDPMLETKLQPDDSGSPSSSSIPPVDIDNVGEAKKEVNLLASEEMHNANEVA
EIGLESVKENGHPILSRVENALSESSQNNSSNDDSGKSGESKIDGEKTLSILTRGRRNRK
QTLRIPISWLNRPYGSQSFKVIYNRVLRGSDTPKSSSFPSGDDCTASAS
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccagaaacagtcgtggaagggccaaaggagagaagaagaagaaagaagataag
gttcttccaatcgtcatggacatcaccgtgaaccttcccgatgaaacttgtgttctttta
aagggaatatcaacggacaggatcatcgatgttcgtcggcttttgtccgtaaggaccgaa
acttgcaacatcacaaatttctcgctatcgcatgaggtaagggggccacatttaaaagac
acggtggacgtttccgcactgaagccctgtgtactgactctggtcgaagaggagtacgat
gaagaagaggcggcagtgtcgcacgttaggagagtgttggacatcgtggcctgcacgacc
agctttggcgcgtgggggtcgaagaacagcccaaaatccgatgaaaatgcaaataacaag
tcgaaatccgatgaagaggaagagacgacgaggcattcgtgtccaaagctcggaaccttc
tatcactttttctctctctcccacctcacccctcctctccaatttataaggagagcaaca
acgagacaacatgtcgatgagattaattcagctgctggtcatcatcttttctcctttgat
gtgaagctttgcaatgggaagttggttcatgtggaagcctgtaggaagggattttatagt
cttggaaagcagcgaacactaactcacaaccttgtcgatttgttacgacagcttagtagg
gcctttgataatgcttacaatgatctcatgaaagcattttcagagcgtaacaagtttggg
aatcttccgtatggcttcagagccaatacatggcttgttcctcctgttgcagcacagtta
ccctcagttttccctcctctcccagtggaggacgaaacttggggaggaaatggaggtggt
ctaggaagagatggaaaaagtgatttgattccttgggctaatgagtttctgtttcttgca
tctatgccttgcaagacaacggaggagaggcaggttcgagataggaaggcattccttctt
cacagcctatttgttgatgttgccattttcagagccgtcaaagctgtccagcatgtaatg
gaacagccggatttaatttgttctgtttcaaatggcgaaattctttatatggagagggtt
ggggatttgagcatcattgtcatgaaagatgtatccaatgcgagctgtaagctagatact
aaaattgacggaattcaagcaactggagtggatgaaaagaatctagcagaacgaaaccta
ctaaaagggatcactgctgatgaaaacactgctgctcatgacattgccactctaggtgct
atcaatttaagatattgtggttatatcgcaacagtgaaagttgagcaaagagagaatgtc
aagagcagcaatccatctcaaagcattgaactccttgatcaacctgatggaggtgccaat
tctcttaatattaacagtttgagattgcttcttcacaaaactccgcctccagagtactat
aagcctgcaccacatatgcaaagtttggagcatgaagagatcaatgcttcacgatctttt
gtagaggggctgttggaaaaaagtcttgctaagcttgaagagaatgaactaggattggat
catgttctgagatgggagcttggagcctgctggatacaacatttgcaagaccagaaaaat
acaggtaaggataagaagccatctggtgagaatgcaaagaatgaaatgaaggttgaggga
cttgggacaaatcttagatcccttaggaacaacaggaagaaaacagatggaagcaatctc
aaagggcagtttgaaaactctagattgaatgcagaaggtgttattggggaagctgaacat
tctatattgccttccatagaatctcagcttgaaaccaatgcaaaagaaaatgagcttgcc
atgaagagggtgttgtctgaagcagcctttgctcgattaaaagaaacagaaactggcctt
cattgcaagtcttttcaagaactgattgacttgtcccaaaaatattacactgaagttgct
cttccaaaactggtagcagattttggttcattggaactctcgccagttgatggccgaact
ctaactgatttcatgcatactagaggtcttcgaatgcgttctctggggcatgttgtcaag
ctttcagaaaagctaccacatgtgcagtcactgtgtattcatgagatgatagtacgagct
tttaagcacattcttctggcagtgattgctgctgttgacaacacagagaaaatggcagta
tcaatagctgctgcattgaatatgatgcttggtgttcttgaaaatgaagagtcaaacaaa
tcttgcaatgtccattcccttgtctggagatggctgcaggtcttcttgaaaaagagattt
gaatgggatcttagtagcttgaactacaaagatattagaaaatttgcaattctacgtgga
ttatgtcataaggtgggtattgagctggttccaagggactttgacatggattctctgaac
ccattccggaaatcagatattgtcagcttggtcccagtgcataagcaagcagcatgctca
tcagcggatgggaggcaactcctggaatcatcaaaaacagctttggataagggaaagctt
gaagacgcagtttcctatgggacaaaggctcttacaaagctggtagcagtttgtggtcca
taccatcgaatgacggcaggggcttacagcctccttgctgtagttttgtatcacactgga
gatttcaatcaggccacagtttatcaacagaaagctctggatatcaatgagagagaacta
ggtcttgatcatccagatacaatgaagagttatggagatcttgctgtcttctattacaga
cttcaacacacagagctggctctaaagtatgtaaagcgagcactgtatcttctacatctc
acatgcggtccatctcatccaaacactgctgcaacatacatcaacgtggctatgatggag
gaaggcctagggaatgtgcatgtagccctcagatatctccacaaagctctgaagtgtaac
caaaggttacttgggccagaccatattcagactgcagcaagttaccatgcaattgcaata
gcactctcgttgatggaagcataccctttgagcgttcagcatgagcaaacaaccttgcaa
attctgcgagcaaagctgggtccggatgaccttcgtacacaggatgctgctgcttggctt
gagtattttgagtccaaggcttttgaacaacaagaagccgcacgaaatggtactcggaag
ccggatgcatccatagcaagcaaaggccaccttagtgtctcagatttgcttgactacatt
aatccaaataacgatgccaaagggagagatggagcagtaaggaggaaaagctatattgca
aaggtgaagggaacatctcatcaagatttaagcccacaaagttctgatgaaaccaccaaa
gaggagatttcagatgaagagacgcctattcctgaaacggaagttagtgcagatgctgat
caggagattagctctgtcactgttgagtcccaacaatctgtcatggaaaagactgtagag
gaaaatccaaatattgcccatgaaatcttttctgaaacacatgctgaaggagaggatgga
tggcaaccggttcaaaggccaagatcagctggctcatatggtcggcgactgaagcagcgg
cgtgcaactattggaagggtctatagttatccaaaaaagaatgtggacacagatatagag
tattctccggtcaagaatcctcataagaccagtaagtattacctattaaagaaacgaaca
acttcacatgggagttatacagatcaccaaacattgaaccctgcccaaggcaccaaattt
ggacggagaatggtcaaaactgtaacatacagggtcaagtcaatgccttcatctaccaaa
actgctacaacagagacccctagaaatagtggtgagcttttcagttctccgttatcttgt
ccaaattctgcgccaaatgatgttggtccagtgaaaaattcaattgtcagtcttggaaaa
tcaccttcgtacaaggaagtagcattggccccaccaggtaccattggtaaattgcagatc
tgggtgccccaaagtgattttgtggataatcgagaacttgactctggaaaacatgaagag
gaaatgaatgaagtaaaaggaaatgacaaattaattagaacagagatggaaagtatagtt
gaagaggaaaaaaagaattctataccaaattccacagatcacttaaaagaggaaattgta
gttgtcaaggagaaagaagacactcagttaactgatgcaatggaagataatccttctttg
gtggcatcagagagcgtggaaagacttgaatctggtagagttgaggttcaagaattggta
gagactggcataattgatggcatgccaaatggtattgattctctcaaaagggaggtgagt
gagaaggattcatctaccagttctgaaacccaacaaaattcacaatctacctgtcaagga
gtagaggatctgcaggaaaaacccttgattctaaattcaagtgatgtaagaggatacccc
aataagaagttgtctgcagcagcagctccatttaatccatcaccagtcattactcgtcca
gcaattgccatgaatatcactcttccttctggtcctggtgctgttccagctattgcaccc
tggccggtaaacataaatgttcaccgtgggcctgctgtcctacccacagttaatccaatt
tgctcctcccctcatcatccatacctgtcacctccaccaaccccaaacatgatacaagca
ttgccctttgtgtaccctccatatactcaaagccaagcagtaccaaccagcacatttcct
gtgacgagcagtggctttcatcctaaccatttcacatggcagtgcaatgtgaacccaaat
gtttcagagtttattcctggtacagtttggactggctgccgtccagtggagtactctgtt
cctcaacctgttgttgagccgatatctgatcccatgttggagacaaaactgcagcctgat
gattctggaagcccaagctcatcttcaattcctccagtggacattgacaatgtgggtgaa
gctaagaaagaagtgaatcttctagcatcagaggaaatgcataatgcaaatgaagttgct
gaaattggactggaaagtgttaaggaaaatggtcaccctattctgtctagggttgaaaat
gctcttagtgaatcaagtcagaacaatagctcaaatgatgattctggaaaaagcggtgaa
agtaagattgatggtgaaaaaaccttaagcattttgactagggggagaagaaatcgaaag
cagactctaagaataccaataagttggctcaatcgaccatatggctcacagtcttttaaa
gttatttataacagagtactcaggggaagtgatacccctaagtcttccagctttccttca
ggtgatgattgtacagctagtgcctcataa
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integrated database retrieval system
