Castanea sativa (European chestnut): 142615328
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Entry
142615328 CDS
T11266
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 5 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
142615328
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csaa04040
]
142615328
Ion channels [BR:
csaa04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
142615328
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
142615328
NCBI-ProteinID:
XP_075644187
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Position
1:complement(81837808..81851458)
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AA seq
734 aa
AA seq
DB search
MMDCSYKSQYMGGQREKFVRLDDLDSRTSSSSDTGLNRCGFNVEGFSRTAHARDGTSRSF
KRGMKKGSDGLKSIGRSLRFGVSRAVFPEDLKASEKKIFDPQDKFLLLWNRLSVVSCILA
VSVDPLFYYLPVINQTSVCIGLDRRLAITVTTLRTIVDAFYLIHMALQFRIAYIAPSSRV
FGRGELVIDPAKIARRYLRGYFIVDFLSVLPLPQVVVWRFLQSSNGPDALATKQALFFIV
LLQYFPRFHRILPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGAFWYLLAVDRND
KCWQKACSGDGICKSSLSCSNLLPASNTWEAVLNSNCSIDDPNLPFDYGIYKNALTSGVV
SHMKFVTKYCYCLWWGLQNLSTLGQGLQTSTYPAEVIFSIALAIFGLILFALLIGNMQTY
LQSLTIRLEEMRVKRRDSEQWMHHRLLPQDLRERVRRYDQYKWLETRGVDEQNLVETLPK
DLRRDIKRHLCLALVRRVPLFDNMDERLLDAICERLKPCLFTENTYIVREGDPVDQMLFI
IRGRLESVTTDGGRSGFFNRSFLKQGDFCGEELLTWALDPKSGANLPSSTRTVKALTEVE
AFALIAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYHKRKNAELRR
KEEEEEEEAEAEASEGSRSSVGGGSFSIGATFLASRFAANALRGVHRNRNARTARELVKL
QKPSEPDFTADDAD
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgatggactgcagttacaagtcacaatacatgggtggccaacgagagaagtttgtaagg
ttggatgacttggattctagaacatcatcatcttctgatactggcttgaatagatgtgga
tttaatgttgagggatttagccgcacagctcatgcaagagatggaacatctagatctttt
aagagaggaatgaaaaaaggatccgatggacttaaatctattggtagatcacttagattc
ggggtttctcgggcagtgtttcccgaagatcttaaagcttcagagaagaagatatttgat
cctcaagacaaattcctcctcttgtggaatagactttctgttgtatcatgtattttggca
gtgtctgtggaccctctcttttattatcttccggtcattaatcaaacatcagtttgcatt
ggtttagatcgaaggttagcaatcacagtgactacattgcggacaattgtcgatgctttt
tatctcattcacatggctctccaattccgaattgcttatattgccccatcatctcgggtt
tttggacgaggggaacttgtgatagaccctgcaaaaatagccaggcgatatttgcggggg
tatttcatcgttgattttctttctgtgctacccctaccacaggttgtggtttggagattt
ctccagagttcaaatggtccagatgcactggctacaaaacaggccttgttttttattgtc
ttgcttcaatattttcccagatttcatcgaatcttacctttaacttcagaactgaaaagg
acagcaggtgtttttgctgaaactgcttgggcaggtgctgcatattacttgctgttatac
atgcttgctagtcatatagttggggcattctggtacctgttagctgtagatcgcaatgac
aaatgctggcagaaggcttgttctggtgatggcatttgcaaaagttccttgtcttgcagc
aacctactcccagcatcaaatacctgggaggctgttcttaattcaaattgttcaatagat
gatcctaatttaccatttgattatggaatctataaaaatgctttgacatctggagttgtt
tcacatatgaagtttgtcaccaaatactgttactgtttatggtgggggctacagaattta
agtacacttggccagggacttcaaaccagcacctatcctgcagaggttatattttccata
gcgcttgcaatatttggtctcatcctctttgcacttctgattggtaacatgcagacctat
ctgcagtcactaactattcggcttgaggagatgagagttaaaaggcgcgattcagaacag
tggatgcatcatcgcttactcccacaggacctaagagagcgggttagacgttatgatcag
tacaagtggttggaaacacgtggagtagacgaacagaatttagttgagactctaccaaag
gatcttaggagagatatcaagcggcacctctgtcttgctttagtgaggagggttcctcta
ttcgacaatatggacgagagattgcttgatgccatttgtgagcgactgaaaccatgttta
ttcacagagaatacttacatagtcagggaaggagatccagttgatcagatgctttttatc
atacgtggtcgcctcgagagtgtaaccacagatggtgggaggagtgggtttttcaaccgc
agttttcttaaacaaggtgatttctgtggggaggagcttctgacctgggcactggatccc
aaatcgggagctaacctcccatcttctactcggacagtgaaggctttaactgaagttgag
gcttttgccctaatagctgaagagttgaaatttgtggcaagtcaatttagacgccttcac
agtagacaggttcaacacaccttccgtttctactcacagcagtggagaacttgggctgca
tgctttatccaagcagcatggcgcagatatcacaaaaggaagaatgcagagcttcggcgc
aaagaagaagaagaagaagaagaagcagaagcagaagcatcagaaggaagccgcagcagt
gttggtggaggttcatttagtattggtgccactttcttagcttccaggtttgcagcaaat
gctcttcgtggtgttcaccgaaatcggaatgcaaggacagctagggaattggtgaaactg
cagaagccttctgagcctgattttactgctgatgatgcagactga
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