Castanea sativa (European chestnut): 142615588 Help Entry 142615588         CDS       T11266                                  Name (RefSeq) protein PAT1 homolog isoform X1   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism csaa  Castanea sativa (European chestnut) Pathway csaa03018   RNA degradation Brite KEGG Orthology (KO) [BR:csaa00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     142615588  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:csaa03019]     142615588 Messenger RNA biogenesis [BR:csaa03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      142615588   mRNA degradation factors    5'-3' decay     Decapping complex      142615588 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  142615588 NCBI-ProteinID:  XP_075644441 LinkDB All DBs Position 11 Genome browser AA seq 821 aa AA seqDB search MDGFGVGGGIEEPPNPQDLNQHGDNNPSGGTLFDASQYAFFGKDVVEEVELGGLEEEEDM LPVAGIEEEEFLYDREEGEDLRSLSDIDDLASTFSKLNKAVSGPRSTGVIGDRESREGSS VAEWAQGDDFPYWLDPQVFDPENTQDGKRWSSQPSGRLAESKSLYRTSSYPEQQQQQHHQ HHQHFSSEPILVPKSSFMSYPPPGGMSPQASPNPHSGHPNMPYLVGGPEMALSSSNLSPF SNSQLQLTGLHHGSNFGGNMSQFSHGLNSRPPNQWVNQSNFYPGEHSSLVNNLLQQRLPH QNGLMPPQVMAQPQPQQHRLHHPVQPSFGHLLGFQSHLFNPHLSPGPPLTSKFEAMLGMS DLRDQRPKSAQKGRQNLRFSQQGFDTSSHKSDIGWPQFRSKYMTSDEIESILRMQLAATH SNDPYVDDYYHQACLARKSAGAKLRHHFCPNQLRDLPPRARANAEPHAFLQVDALGRVPF SSIRRPRPLLEVDPPSSSVAGGTEQKALEKPLEQEPMLAARVTIEDGLCLLLDVDDIDRF LQFNQLQDGGAQLRRRRQVLLEGLAASLQLVDPLSKDGNTVGLAHKDDFVFLRLVSLPKG RKLLARYLQLLLPGGELLRIVCMAIFRHLRFLFGGLPSDPAAAETANNLAKVVSLCVRSM DLSAISACLAAVVCSSEQPPLRPLGSSAGDGASLILKSVLERATELLTDPRAASNYNITN RSLWQASFDEFFALLTKYCINKYDSWLMQAQAPMAVIGSEAARAISKEMPVELLRASLPH TDEHQKKLLWEFAQRSMPIGGFNSNGGGSTGGQMNSESVLS NT seq 2466 nt NT seq  +upstreamnt  +downstreamnt atggatgggtttggtgttgggggtggtattgaagagcctcccaaccctcaagatcttaat caacatggagacaacaatccttcaggaggtacattatttgatgcatcgcagtatgcattt tttggcaaagatgttgttgaggaagttgagttgggcgggttggaagaggaagaggatatg ttgcctgtggctgggatagaggaggaggaatttctgtatgatcgagaagagggtgaggat ttacgatctctgtctgatattgatgatcttgctagtactttctcaaagttaaacaaggct gttagtggaccaagaagcacaggagttattggtgatagggaatccagagaaggttcatcc gttgctgaatgggcacaaggggatgattttccttactggttggatccacaagtatttgat cccgaaaacactcaggacggcaagcgatggtcatcgcagccatctggacgccttgcagaa tcaaagtctttgtacagaacatcttcataccctgagcagcaacaacagcagcaccaccaa caccaccaacatttctccagcgagccaattctagtgccaaaatcttcttttatgtcatat cctccccctggtggcatgtctcctcaggcttcaccaaacccccactcaggccacccgaat atgccatatcttgttggtggacctgagatggcattatcttcgtcaaatttgtctcccttc tctaattctcagcttcagttgactggtttacatcatggttcaaattttggtggaaatatg tctcagtttagtcatggtctgaatagccgaccaccaaatcaatgggttaaccagtccaac ttttaccctggagagcattccagcctcgtgaacaatttgttgcaacaacggttacctcat cagaatgggttaatgccaccacaagtaatggcacaaccacagccacagcagcataggctg caccatcctgttcagccatcatttggccatttattggggtttcagtcacacctatttaat cctcatctttctccaggcccacccttaacgagcaagtttgaagcaatgcttggaatgtct gatctaagagatcaaagaccgaaatcggctcagaaggggagacagaatctccggttttcc caacagggttttgataccagtagccataagagtgatattgggtggccgcagtttagatca aagtatatgacatctgatgagatagagagtatccttagaatgcagcttgcggcaacacac agtaatgatccatatgtagatgactattatcaccaggcttgtcttgctagaaaatctgct ggggcaaagcttagacatcatttctgcccaaatcaactgagggatcttcctcctcgagcc cgtgctaatgctgagccacatgcttttctccaagttgatgctcttgggagagttccattt tcatcaattcgtaggcctcgcccacttcttgaagttgaccctccaagttcatctgttgct ggtggcactgagcaaaaagctttggagaagcccctggagcaagagccgatgcttgcagct agagtcacaattgaggatggcctttgtcttcttcttgatgtagatgatattgaccgtttc ttacagttcaatcagcttcaagatggtggagcccagttgagacggaggcggcaagtcctg ctggaagggctggcagcatcgcttcaactggttgatccacttagcaaagatggcaatact gttgggcttgctcataaggatgattttgtgttcttacgattggtttctcttcccaagggg cggaagctccttgcaaggtatcttcagcttctacttccaggtggtgagctcttgcgaata gtttgcatggcgattttccgtcatttaaggttcttatttggtggccttccatctgatcca gcagcagcagaaacggcaaataatcttgcaaaggttgtttcactgtgtgtacgtagcatg gatcttagtgctatcagtgcctgtctagctgcagtagtttgttcctctgagcagccccca ctccgtcctcttggaagctcagctggagatggggcttccctgattcttaaatctgttctt gagagggcaactgaactcttaactgatcctcgtgctgctagcaactataatataactaat cggtcactttggcaagcttcatttgatgaattctttgcccttctcactaagtactgcata aataaatatgattcctggcttatgcaagcacaagcccctatggctgttattgggtcagag gcagcaagagctattagtaaggaaatgccagttgagctgttacgtgcaagtcttcctcac actgatgagcaccaaaaaaagctactgtgggaattcgcacagcgctctatgcctataggt ggatttaacagtaatggtgggggaagtactggtggtcaaatgaattctgagtcagtgttg agttga

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