Castanea sativa (European chestnut): 142615675
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Entry
142615675 CDS
T11266
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
142615675
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csaa01002
]
142615675
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csaa04121
]
142615675
Enzymes [BR:
csaa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
142615675
Peptidases and inhibitors [BR:
csaa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
142615675
Ubiquitin system [BR:
csaa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
142615675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
ubiquitin
Malt_amylase_C
pP_pnuc_2
Nitroreductase
Motif
Other DBs
NCBI-GeneID:
142615675
NCBI-ProteinID:
XP_075644542
LinkDB
All DBs
Position
11:complement(36378382..36432103)
Genome browser
AA seq
1131 aa
AA seq
DB search
MTLMTPPPLDQQQQPQPQPQPQPQPQQEDDEMLVPNTDLLEGPQPMEVAQAETTSTVEAQ
AVDDPPSARFTWTIDNFSRLNIKKLYSDVFLVGGYKWRILVFPKGNNVDHLSMYLDVADS
TNLPYGWSRYAQFSLSVINQIHNKYSIRKETQHQFNARESDWGFTSFMPLGELYDPGRGY
LVNDTCIVEADVAVRRVVDYWSHDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKNV
YHMPTTENDMPTGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNR
VLSEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVY
ASFDKYVEVERLEGDNKYHAERYGLQDARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKI
NDRYEFPLELDLDRENGKYLSPDADKTVRNLYILHSVLVHSGGVHGGHYYAYIRPTLSDQ
WFKFDDERVTKEDVKRALEEQYGGEEELPPANPGFNNSPFKFTKYSNAYMLVYIRESDKE
KIICNVDEKDIAEHLRIRLKKEQEEKEQKRKEKAEAHLYTIIKVARNEDLIEQIGRDIYF
DLVDHDKVHSFRIQKQISFNLFKEEVAKELGIPVQFQRFWLWAKRQNHTYRPNRPLTPQE
EAQSVGQLREVSNKANNAELKLFLEVELGQDLQPVPPPERTKEDILLFFKLYDPSKEELR
YVGRLFVKGSGKPVEILPKLNEMAGFSADEEIELYEEIKFEPTIMCERIDKKVTFRASQL
EDGDIVCFQKSPQVGSSDQCRYPDVPSFLDYVHNRQVVRFRSLEKPKEDEFCLELSKLHD
YDDVVERVAQHLGLDDPSKIRLTSHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDILY
YEVLDIPLPELQGLKTLKVAFHHSTKDEVVIHTIRLPKQSTVGDVINDLKTKVELSHPNA
ELRLLEVFYHKIYKIFPLSEKIENINDQYWTLRAEEVPEEEKNLGPHDRLIHVYHFMKDT
AQNQVQVQNFGEPFFLVIREGETLAEVKERIQKKLQVPDEEFSKWKFAFLSLGRPDYLQD
SDIVSSRFQRRDVYGAWEQYLGLEHTDNAPKRSYAANQNRHTFEKPVKIYN
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgactctgatgactcctccaccgttagatcagcaacagcagcctcagcctcagccgcag
ccgcagccgcagccgcaacaggaggatgatgagatgttggttccgaacaccgacttgctc
gaaggccctcagcccatggaagtagctcaagcagaaaccacaagcacagtggaagctcag
gccgtggatgatccaccatctgcgaggttcacttggacaattgataatttctcaaggctt
aatataaagaagctctactctgacgtttttttggtcggaggctacaaatggcgaatacta
gtcttcccaaaggggaacaatgtcgatcatttgtctatgtatctagatgttgcagattca
acgaatttgccttatggctggagtagatatgcccagttcagcttgtctgttatcaaccaa
atccataataaatactcaattagaaaagaaacacagcaccagttcaatgcacgtgagagt
gattggggtttcacttcattcatgcctcttggtgaactttatgaccctggtagaggttat
cttgtgaatgacacatgcatagttgaagctgatgttgctgtacgtagagttgttgattat
tggtcacatgactcgaagaaggagactggttttgttggacttaaaaaccagggagctaca
tgctacatgaattctcttcttcagacactgtatcatataccttacttcagaaagaatgtg
tatcatatgccaaccaccgagaatgatatgccgacagggagcatccctctggctttgcag
agtttattttacaagctccaatacagcgacactagtgtagcaacaaaagagctgacaaag
tcttttggatgggacacatatgattcttttatgcagcatgatgtgcaagaacttaatagg
gttctttctgaaaagctggaagataaaatgaagggaactgttgtggagggtacaatacag
cagttatttgaagggcaccatatgaattatattgaatgcatcaatgtggactataagtca
acaagaaaagaatcattttatgatcttcagcttgatgtcaaaggttgtcgggatgtttat
gcttcttttgacaaatatgtggaagtggaacgtcttgagggtgataataagtatcatgct
gaacggtatggtttacaggatgctaggaaaggtgttttgttcattgattttccgcctgtc
cttcaacttcagctaaaaaggtttgagtatgattttatgcgggataccatggtaaagata
aatgaccgctatgagttccctttggaacttgatcttgatagagagaatggcaaatatcta
tcgccagatgcagataagactgttcgcaacctctacatacttcacagtgttttggttcac
agtggtggggtgcatggtggacactactatgcatatatcaggccaaccctatctgatcag
tggtttaaatttgatgatgaacgagtgacaaaagaagatgttaagagggcactagaggag
cagtatggtggtgaggaagagttgccaccggcaaatcctgggttcaacaactccccattt
aagtttaccaaatattcaaatgcatatatgcttgtatatatacgtgaaagtgacaaggag
aaaataatttgtaatgtggatgagaaggacattgcagaacaccttaggataaggttgaag
aaagaacaagaagaaaaggagcaaaagagaaaggaaaaagcagaggcgcacctctacacc
atcataaaggttgcacgtaatgaggacctaattgaacagattggaagggatatatatttt
gatcttgtagatcatgacaaagttcatagttttcgtattcaaaagcagatttcgtttaac
cttttcaaggaagaagttgccaaggagttgggtataccagtgcaatttcaacggttttgg
ctttgggcaaagcgccaaaaccatacatacaggccaaatcgaccactgacacctcaggag
gaagcacaatcagttggacagttgagagaagtttccaataaggcaaataatgcagagctt
aagttgtttctagaagtagaacttgggcaggatttgcagcctgttcctcctcctgaaagg
acgaaagaagatattctgctattctttaagctatatgacccatcgaaagaggagctccga
tatgttgggaggctttttgttaagggtagtggtaagccagtggaaatattgccaaaacta
aatgaaatggctggattcagtgctgatgaagaaattgaactttatgaggaaataaagttt
gaacctactatcatgtgtgaacgcattgacaagaaggtgactttccgtgcgagtcagctc
gaagacggggacatcgtttgctttcagaaatcccctcaagttggaagcagtgatcaatgt
cgctatccagatgttccttcattcttggattatgttcacaatcgtcaggttgttcgcttt
cgatcattggagaaaccaaaggaggatgaattctgtcttgagttgtcaaaacttcatgat
tatgatgacgttgtggaaagagtagcccagcatcttggcttggatgatccatccaaaatt
aggctcacatctcataactgttattcccagcaacctaaaccccagcctatcaagtaccga
ggagtggaacatttgtctgacatgctagtccactataatcagacttctgatattctctat
tatgaagtattggatatacccctgccagaattgcaaggcctaaaaactttgaaagttgct
tttcatcattctacaaaggatgaagtagtgattcatactattagattaccaaaacagagc
actgtgggagatgttattaatgacctaaagacgaaggtagagttgtctcatcccaatgca
gaactcagattgcttgaagttttctatcacaagatctataagatcttcccgctcagtgaa
aagattgagaatattaatgatcaatactggacattacgtgctgaggaggttcccgaagag
gaaaaaaaccttggtcctcatgatcgcttaattcatgtttatcattttatgaaggataca
gctcagaaccaggtgcaggttcaaaattttggagaaccatttttcttggttatccgtgag
ggtgagacattagctgaagttaaggagcgcatacagaaaaagttgcaagtacctgatgag
gagttttctaagtggaagttcgcatttttgtcattgggtcgtccagattatctccaggac
tctgacattgtgtccagtcggtttcagagaagggatgtttatggtgcttgggagcagtat
cttgggttggaacacacagacaatgctcctaaaaggtcatatgcagctaatcagaatcgt
cacacatttgagaagccagtgaaaatctacaattag
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integrated database retrieval system
