KEGG   Castanea sativa (European chestnut): 142615729
Entry
142615729         CDS       T11266                                 
Name
(RefSeq) protein ELC-like
  KO
K12183  ESCRT-I complex subunit TSG101
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa03250  Viral life cycle - HIV-1
csaa03272  Virion - Hepatitis viruses
csaa04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    142615729
   03272 Virion - Hepatitis viruses
    142615729
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    142615729
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csaa04131]
    142615729
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csaa04147]
    142615729
Membrane trafficking [BR:csaa04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    142615729
Exosome [BR:csaa04147]
 Exosomal proteins
  Proteins found in most exosomes
   142615729
SSDB
Motif
Pfam: UEV Vps23_core UQ_con SWI-SNF_Ssr4_C Nsp1_C HAUS1 Nuf2_DHR10-like
Other DBs
NCBI-GeneID: 142615729
NCBI-ProteinID: XP_075644637
LinkDB
Position
11:complement(56808309..56813224)
AA seq 401 aa
METQQFLSSVLSQRGPSALPYSEDTKWLIRQHLVSLTSAYPSLDPKTATFTHNDGRSVNL
LQAEGTIPVSFQSVTYNIPIIVWLMESYPRHAPCVYVNPTRDMIIKRPHPHVNPSGLVSI
PYLQNWIYPSSNLVDLARNLSLHFGRDPPLYSQRRPNPNPSPNFNPYTPTHAPAAAYTRP
AIPPPRSYPASPYGAAAAAAAVQTEDPSEVFKRNAVNKLVEAVHGEVVSMRKAREAEMEG
MFNAQAVLRHREEQLRKAVKEMHDEKEGLEQQLQMVLMNADILEAWLRENEAKVRSFGES
DVDVDDAFECMDALSKQMMDCTAADLALEDAVYALDKAAQEGAVPFDQYLRNVRLLSREQ
FFHRATATKVRAAQMQSQVANMAARISHYGGEPDALPRVRA
NT seq 1206 nt   +upstreamnt  +downstreamnt
atggagacccaacaattcctaagctccgtcctctcccaacgcgggccttccgctctccca
tactccgaagacaccaaatggctaatccgccagcacctcgtctctttaacctccgcatac
ccatctctcgaccccaaaaccgccaccttcacccacaacgacggccgctccgtcaacctc
ctccaggccgaaggcaccatcccggtttccttccagtccgtcacctacaacatcccgatc
attgtctggctcatggagtcctacccccgccacgcgccctgcgtctacgtcaaccccacg
cgcgacatgatcatcaagcgccctcaccctcacgtcaacccttcgggcctcgtgtcaatc
ccttacctccagaattggatctacccgagctccaacctcgtcgacctcgcccggaatctc
agcctccatttcggccgcgatccgccgctgtactcgcagcgccggccgaaccctaaccct
agccctaatttcaacccttatacccccactcacgcgccggcggcggcttacacgcgccct
gcgattcctccgccgcggtcctacccggcttctccttacggcgccgccgccgccgcggcg
gcggtgcagacggaggatccgtcggaggtgttcaagaggaatgcggtgaacaagctcgtc
gaggcggtgcacggcgaggttgtttcgatgaggaaagcgcgtgaggcggagatggaaggg
atgttcaacgcgcaggcggtgctccggcaccgggaggagcagctgaggaaagccgtgaag
gaaatgcacgacgagaaggaagggttggagcagcagttgcagatggttctgatgaatgcg
gatattctcgaagcttggttgagagagaacgaagcgaaggtgcgtagcttcggagagagt
gacgtggatgtggacgacgcgttcgagtgtatggacgcgttgtcgaagcagatgatggat
tgcacggcggcggatttggcgctcgaggacgccgtgtacgccctcgacaaggcggcgcag
gaaggcgcggtgcctttcgatcagtacttgaggaatgtgaggctcttgtcacgcgagcag
ttctttcatcgggccaccgcgacgaaagtcagggctgcgcaaatgcagtctcaggtggct
aatatggctgcccggatttcgcactatggtggggagcctgatgctttgccgcgtgttcga
gcttga

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