Castanea sativa (European chestnut): 142615801
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Entry
142615801 CDS
T11266
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 10
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
142615801
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csaa04040
]
142615801
Ion channels [BR:
csaa04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
142615801
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
142615801
NCBI-ProteinID:
XP_075644751
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All DBs
Position
11:4561902..4567897
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AA seq
641 aa
AA seq
DB search
MDSKRLKCLRFKRFKKRKSILPVSDQQESAPRRTFIDPRRQFLLTWNKIFMLSCVISMAL
DPLFFYIPVIHDKDKCLDSDLTLAKIACVLRSLFDAFYVLHIIFQFRTGFTTPYSLVFGL
GEPIADPVAIAKRYLSTYFLIDILSILPLPQVLVFITIPSIKTQAPLFMKLVIFSQYVPR
ITRICILYREETRTSGMLIQPWTGAAYNLFLYMLASHVLGAFWYLCAIEREETCWQKHCK
NSTGCEDKDFYCGDYRNESFAHLYYECPFIKPDDIENTTVFNFGMFTDVLKSGMVETKDF
QVKLFYCFWWGFRSLGSLGQNLQTSTSIGEMIFAIFISTFGLVLFSFLIGNMQRYLQSTS
VRIEEMTQVRVERTGVERWMSHRMLPKELRARVRRYQQYKWQLTRGVEEENLLQRLPKDL
RRDITRHMCLNLLKRVPMFEQMDSQLFDALCDRLKPVLHTEKSCIILEGDPVDEMLFIMR
GTLTSMTAEPGYACNLKAGDFCGEELIAWALNPRSSTSLPISTRTVIAQTEVQAFALWAA
DLKFVASQFRHFHSKQFQHIFRFYSLQWRKWAARRIQAAWLRYHERKLYKSLYEAEDGLQ
DGVTDEAGTSKVEHNGERKAPKRLLLLPKKPDEPNFYYEDY
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggattccaagcgactcaaatgcttaaggtttaaaagattcaaaaaacgaaaaagcatc
cttcccgtgagtgatcagcaagagtcagctccgaggaggacgtttattgatccacggcgt
caatttctactaacttggaataaaatatttatgctctcttgtgtgatatctatggccctg
gatccattgttcttttacatcccagtgatccatgacaaggataaatgccttgattccgac
ctcacactggccaaaattgcttgtgttcttcgttcactctttgatgctttctatgtactt
catattatctttcagttccgtactgggtttactaccccttattctctagtcttcggattg
ggtgagccgattgctgatccggtggctatagcaaaaagatacttatccacatacttcctc
attgacattctgtcaattcttccattaccacaggtcctagtttttattaccattccctca
atcaaaactcaagccccattattcatgaagctcgtaatcttctcccaatatgtgcctaga
attactcggatctgtatactatacagggaagaaacaagaacctccggcatgttaattcaa
ccatggactggagctgcttataatctttttctctatatgctagccagtcatgtacttgga
gctttttggtacttgtgtgccattgaacgagaggaaacatgctggcaaaagcactgtaaa
aactccactggttgtgaagataaagatttttactgtggagactaccgtaatgaaagcttt
gcacatctatattatgagtgcccttttatcaaacctgatgatattgaaaatacaacggtc
ttcaactttggaatgtttactgatgttctgaagtctggtatggtggaaacaaaagatttt
caagtgaaattgttttactgcttttggtggggttttcgtagtcttggctctcttggccaa
aaccttcaaacaagcaccagtattggtgaaatgatatttgcgatcttcatatctaccttt
gggttggttttattctcattccttattggcaatatgcagagatatctgcaatccacatca
gtgagaatagaagaaatgactcaagtgagagtggaaaggactggtgtagaacggtggatg
tcccaccgtatgctccctaaggaattaagggcacgagttagacgataccaacaatataaa
tggcaactaaccagaggtgttgaggaagagaatctacttcaaagacttcctaaggacctc
cgaagggacataacacgccatatgtgcttaaatcttctcaagagagtgccaatgtttgaa
caaatggatagtcaactgtttgatgcactttgtgatcgtctcaaaccagttcttcacaca
gagaagagctgcattatccttgagggggatccagtggatgagatgctctttatcatgcga
ggaaccctgaccagtatgactgcagaacctggttatgcttgtaatctgaaggccggtgac
ttctgtggagaagaacttattgcgtgggctttgaatccccgctcctctaccagtcttccc
atttcaacaagaacagtaatagctcaaacagaggttcaagcctttgcgctatgggctgct
gatttgaagtttgtggcctctcagtttcggcattttcatagcaagcagttccagcatatt
ttcaggttctactccttacaatggagaaagtgggcagctcgtcgcatccaagcagcttgg
ctcaggtaccatgagagaaagctttataagtctttgtatgaagcagaagacggattgcaa
gatggtgtgacagatgaagcagggacctcaaaggttgaacacaatggtgaacgcaaagca
ccaaaaaggttgctgctactgccaaagaagccagatgaacccaatttctattatgaagat
tattag
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