Castanea sativa (European chestnut): 142615838
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Entry
142615838 CDS
T11266
Name
(RefSeq) protein SUPPRESSOR OF PHYA-105 1 isoform X1
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
142615838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csaa04121
]
142615838
Ubiquitin system [BR:
csaa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
142615838
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_TEP1_2nd
EIF3I
Pkinase
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_like
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
PK_Tyr_Ser-Thr
Beta-prop_WDR75_2nd
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
142615838
NCBI-ProteinID:
XP_075644809
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Position
11:complement(28261511..28272048)
Genome browser
AA seq
1080 aa
AA seq
DB search
MVCSDGMKRAAEEMAVNDAVGNEELKRKDFDPSLKPEGQNFLRSPVTCLSVRGEWLERSE
NDCLAALEGKDLNRCIASLDGSEPLTTSSTIDTGLVVEELTVGNYRNQNLDLVSSPSKAK
QGQWQYLYQLASGSRSKGSQGDLASTGKDQVLLRVREELVTMNSDPRSLKLLSSKLLDPA
PKGVFAYMRASEDKIISSNSLSTTPARLKALSTSSFSQLFVKKSLAGKGSICGAPEACSG
FGGAIGDQNDEKLHDVTKVASSALLKLSANNGQSSMHRINRSGPEPFNDGISLREWLKPG
RSKLNKAESVLIFRQIVEIVDFAHSQGVVLNDLWPSSFFILRSSRVKYTGSSTAVRELEG
LMCQESFRKRPLEQEERAYLSLGAKQRRICEEMNSIKQQPYFMTNGGLSTKSMKETEISI
TGPEDSGHTELQSQNNSSCQNKYLATQQTIPITVHSYQNKSLAAQQYVSATVQSEEKWYT
SPEDLNERGCTFSSNIYGLGVLFFELLCIFESSEAHSAVMLDLRHRILPPNFLSENPKEA
GFCLWLLHPEPSSRPTTREILQSELIFGSQELHSGDDFSVSGSVEDGESEPLLHFLISLK
EQKQNHASKLAEDIECLEEDIKLAERRHLIGTSTAFSWGQDEIPNVGKSGFLFLDAINSG
VSSRSFSVSKLNEERLMRNISQLEDAYFSMRSQIQLRENAIAERSDKELLNNRERWTHVK
NEHEKPSRNQKSIDRLGAFFEGLCKFCHYSKFEVCGTLRNGDLLNSANVTCSLSFDRDED
YLAAAGVSKKIKIFEFSALLDDSVDIHYPVVEMSNKSKLSCVCWNNYIKNYLASTDYDGV
VQMWDAGTGQGFSQYMEHQKRAWSVDFSQSDPTKFASGSDDCSVKLWSINEQDSIVTIWN
PANVCCVQFSAYSTHLLAFGSADYKIYCYDLRHTRIPWCTLADHGKAVSYVKFLDSETLV
SASTDNTLKLWDLNKTSSIGLSSTACSLTFVGHTNEKNFVGLSVLDGYIVCGSETNEVYS
YYRSLPMPITSYKFGSTDPVSGNDIGDDKGQFVSSVCWGKKSNVVVAANSSGSMKLLQMV
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgttccgacggtatgaaacgagctgcagaggaaatggctgtaaatgatgcagta
ggaaatgaagaacttaaaagaaaagattttgatccttccctgaaaccagagggtcaaaat
ttcttgagatcaccagtgacctgcttatctgtgagaggtgaatggctggagagatcagaa
aatgattgtttggctgccttggaggggaaggatttaaatagatgcatagcttctttagat
ggttctgagcctctgactactagttctacaattgatacagggcttgttgtggaagagtta
acagtgggaaattataggaaccaaaatttagatttagttagtagccccagcaaagctaag
cagggccagtggcaatatctatatcagttagcaagtgggtctagaagtaagggttcacag
ggtgatttggcttctactggcaaggatcaagtattgttgagagtcagagaagagttagta
actatgaattctgacccgaggagtctgaagcttttgtcgagcaagttacttgatcctgca
ccaaagggagtttttgcatatatgagggctagtgaagacaagattatctcaagcaattca
ctatctactactcctgctcgattgaaagccttgtcaacatctagcttttctcagctattt
gtaaagaaatccttggcaggaaagggatctatctgtggagccccagaggcttgcagtggg
tttggtggtgcaattggggaccagaacgatgaaaagttgcatgatgtaactaaggtagct
tctagtgctttattaaaattaagtgccaacaatggtcagtcttccatgcatagaattaat
aggtctggtcctgaaccgttcaatgatgggatcagcctaagggaatggcttaaacctggg
cgtagtaaactaaacaaagctgaaagcgtgcttatattcaggcagattgtggagatagtg
gatttcgcacactctcaaggagttgtcttaaatgacttatggccatctagtttctttata
ctgcgatcaagtagagttaaatacactggttcctcaacagctgtgagagaattagagggt
ttgatgtgtcaagaatcatttcggaaaaggccattggaacaagaggagcgtgcctacctt
agtttgggtgcaaagcagcgaagaatatgtgaggaaatgaattctattaaacaacagcct
tacttcatgactaatggtggcttaagtactaaatcaatgaaagagactgaaatttcaatc
actggtccagaagattcaggacacactgaacttcagtctcaaaacaattccagttgccaa
aataaatatctggctacacagcagactattcctataactgttcacagctaccaaaataaa
tcactggcagcacagcagtatgtttctgcaactgttcagtcagaagagaagtggtatact
agtccagaggatctcaatgagagaggttgcacattttcatcaaacatctatggtcttggt
gtccttttttttgagttgctctgcatttttgaatcaagcgaggcacattctgcagtgatg
ttggatttgcgccatcggattcttccaccaaattttctctcagaaaatcccaaggaggcg
ggcttttgtctttggcttcttcatcctgaaccttcatctcgtccaacaactagggaaata
ctccagtctgaactgatatttggatcccaagaattgcattctggggatgatttctcagta
tctggttctgttgaggatggtgaatcagagccattacttcatttcctaatttcattgaaa
gaacagaaacagaatcatgcctccaagttagctgaagatatagaatgcttagaagaagat
attaaattggctgagagaaggcacttaatagggacatccacagctttttcttggggacag
gatgaaattcctaatgtagggaaatcagggttcctttttctagatgctataaattcaggt
gtgtcatcaagatcgttttcagtttcaaaattaaatgaagaaagattgatgagaaatatc
agtcagctagaggatgcttacttctccatgagatcccaaatccagcttagagaaaatgcc
attgcagaacgctctgataaagagttgctaaataaccgagaaaggtggacacatgtaaaa
aatgaacatgaaaaaccaagcagaaaccagaaaagcattgatcggcttggagcctttttt
gaaggtttatgcaagttttgtcactatagcaagtttgaagtttgtgggacattaagaaat
ggagatcttctcaactctgcaaatgtgacttgctctttaagttttgaccgtgatgaggac
taccttgcagcagccggagtatcaaagaaaatcaagatttttgagttttctgctctttta
gatgactctgttgatatccattatcctgttgttgagatgtcaaataaatcaaagcttagc
tgtgtttgctggaacaactacatcaagaactatctggcttcaacagattatgatggtgtg
gttcagatgtgggatgcaggcactggtcaaggattctctcaatacatggaacaccaaaag
agggcttggtctgttgacttttctcaatctgaccccacaaagtttgcaagcggaagtgat
gactgttctgtgaaactgtggagcattaatgagcaagattctattgtcaccatttggaac
ccggccaatgtctgctgtgttcagttctcggcttactctactcatctattggcttttgga
tcagctgattacaagatttactgctatgatcttcggcatacaagaatcccttggtgcaca
ttagctgatcatgggaaagctgtcagctatgtaaaatttttagattcagaaacccttgtt
tctgcatctactgacaatactttgaagctttgggatctaaataaaactagctcaattggg
ttgtcctccactgcttgtagcttaacctttgttggtcatactaatgagaagaattttgtc
ggtttgtccgttttggatggatacatagtatgtggctcagaaactaatgaggtatacagc
tattatagatctctgccaatgccaatcacttcttacaaatttggatcaactgatcctgtt
tctggaaatgatattggtgatgataagggacagtttgtttctagtgtctgttggggaaaa
aagtccaacgtggttgttgctgctaactcaagtggaagcatgaaactattgcagatggtg
tga
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