KEGG   Castanea sativa (European chestnut): 142617104
Entry
142617104         CDS       T11266                                 
Name
(RefSeq) uncharacterized protein LOC142617104
  KO
K25059  replication stress response regulator SDE2
Organism
csaa  Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csaa03041]
    142617104
   03032 DNA replication proteins [BR:csaa03032]
    142617104
   03400 DNA repair and recombination proteins [BR:csaa03400]
    142617104
Spliceosome [BR:csaa03041]
 Complex C
  Other components
   Complex C specific factors
    142617104
DNA replication proteins [BR:csaa03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    142617104
DNA repair and recombination proteins [BR:csaa03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    142617104
SSDB
Motif
Pfam: SDE2_2C SDE2 ubiquitin
Other DBs
NCBI-GeneID: 142617104
NCBI-ProteinID: XP_075645915
LinkDB
Position
11:26250039..26256831
AA seq 438 aa
MEEDNSSKIYHLFVKLLDGKTLTLRLPSPTVPALAIKHRVHEITKIPLGQQRLVTTGLCS
VSDETLIRCPEGTSLFPSVQLSGRLAGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGR
RLRHVNAEKRLEEWKAEEEERKLEKIAEDFIKKKAKKGKKGVGDGLAHKYVAKYREESER
CVAEVLDSVNDALALKKRKAGPAATSEAKRANIWMGKRKLGESDSDDTDEDEDEEERKEK
SVVLNGENHSDLSKEEVEGSSGSVTGEKQVACESESGSEGEKDIVLQEIVESNGCAEVVE
PVICDKEMSETTSVSFSDSTPEAVAVEETANVLNFGNREACDKSLSVDSQTNGNLDSKSS
VHEETVVTTNAAELEKPLNFDEFNSAEEMEVLGMERLKSELQAHGLKCGGTLQERAARLF
LLKSTPLDKLPKKFLAKK
NT seq 1317 nt   +upstreamnt  +downstreamnt
atggaggaggacaacagcagcaaaatctaccatctcttcgtgaaactattagacggaaaa
accctaaccctaagactcccttccccaaccgtaccagccctcgcgatcaagcaccgcgtc
catgaaatcaccaaaatacccctagggcagcaacgcctggtcacaaccggactctgctcc
gtgtcagacgagaccctgattcggtgccccgagggcacatcgttgttcccgagcgtgcaa
ctgtcgggtcgactcgcgggcgggaagggcgggttcgggtcgctgctgcgtggggcggcg
acgaaggccgggcagaagaagacgaacaacttcgacgcgtgccgcgacatgagcgggcgg
aggctgcgccacgtcaacgcggagaagcggcttgaggagtggaaagctgaggaggaggag
aggaagctggagaagattgctgaggactttatcaaaaagaaggccaagaaggggaagaaa
ggcgtcggagacggccttgctcataagtacgtcgccaagtatcgggaagagtccgaacgc
tgcgtcgcggaggtgcttgattctgtcaatgacgccctcgccctcaagaagcgcaaggca
ggtcccgccgcaacctccgaggcaaagcgcgctaacatttggatgggaaagagaaaattg
ggcgaaagtgatagtgacgacacggatgaggatgaggatgaggaggagaggaaggagaaa
tctgttgtgttgaatggcgagaatcattctgatttgagtaaggaggaagttgaggggagt
tctggttcggttactggtgagaagcaggttgcttgtgagagtgagagtggctctgaggga
gagaaagatattgttttgcaagaaatagtggaatctaatggatgcgctgaggtggttgaa
cctgtgatctgcgacaaggagatgtctgagactacaagtgtatcattttcagattctaca
cctgaggctgtggctgtggaagaaactgccaatgttttgaactttggaaatagggaagct
tgtgacaagagcttatcggttgattctcaaaccaatggtaatttggactcaaaatcgagt
gttcatgaggaaacagttgtgactactaatgctgcagaattggaaaagccgctcaatttt
gatgaatttaattcggcagaagaaatggaggttcttggcatggaaaggttaaagtctgaa
ttgcaggcacatgggttgaaatgtggaggtactttgcaagagcgtgctgccaggcttttc
ctgctgaaatctacgcctttggataagcttcctaagaagtttctggcaaagaaatga

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