Castanea sativa (European chestnut): 142617249
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Entry
142617249 CDS
T11266
Name
(RefSeq) tyrosine--tRNA ligase 1, cytoplasmic-like
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
142617249
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csaa01007
]
142617249
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csaa03016
]
142617249
03029 Mitochondrial biogenesis [BR:
csaa03029
]
142617249
Enzymes [BR:
csaa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
142617249
Amino acid related enzymes [BR:
csaa01007
]
Aminoacyl-tRNA synthetase
Class I (A)
142617249
Transfer RNA biogenesis [BR:
csaa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
142617249
Prokaryotic type
142617249
Mitochondrial biogenesis [BR:
csaa03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
142617249
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
eIF-3_zeta
DUF2738
Motif
Other DBs
NCBI-GeneID:
142617249
NCBI-ProteinID:
XP_075646143
LinkDB
All DBs
Position
11:complement(57205572..57209488)
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AA seq
390 aa
AA seq
DB search
MATEAPDQDQNEAAAPPEAEIQSLAISSSSSSNLTNQMMMSLEERYQIVRSIGEECIQED
ELRNLLEKKPEPICYDGFEPSGRMHIAQGVMKAINVNKLTSAGCRVKIWIADWFAQLNNK
MGGDLKKIEVVGRYLIEIWKAVGMDIDGGKVEFLWSSKEINSRAHEYWPLVMDIARRNTV
SRIKRCGQIMGRSDEEELTAAQIFYPCMQCADVFFLKADICQLGMDQRKVNVLAREYCDD
IKRKNKPIILSHHMLPGLQQGQEKMSKSDPQSSIFMEDDEAEVNLKIKRAYCPPDIVEGN
PCLEYVKYLILPWFKKFVIERSAENGGDKSFENFEELVAYYESGKLHPADLKPALAKALN
KILEPVREHFKNDKDAKDLLKRVKAYRVTR
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggaagcacctgatcaagatcaaaacgaagccgccgcaccacccgaggcagag
attcaatccctcgcaatctcttcctcttcctcatccaacctaaccaaccagatgatgatg
agcctggaggagaggtaccagatcgtgaggagcataggagaggagtgtattcaagaagac
gagcttcgtaatcttctcgaaaagaaacccgaacccatttgctacgacgggttcgagccc
tccggtcgaatgcacatcgctcagggagttatgaaggcaataaatgtgaacaagctgaca
tctgctgggtgcagagtgaaaatatggattgcagattggtttgcccagctaaacaataag
atgggaggtgacttgaagaaaattgaggttgttgggcgctacctcattgagatttggaag
gccgtcgggatggatattgatggagggaaggtggagtttctgtggtcctccaaggagata
aactcgagagctcacgagtactggcctcttgtgatggatatagcacgaaggaatacggtt
tcaaggataaaaaggtgtggtcaaattatgggtcgaagtgacgaggaagagttgactgca
gcacaaattttctacccgtgcatgcaatgtgctgatgtgtttttcttgaaggccgacatt
tgccaactgggaatggatcagcgaaaagtgaatgtacttgcaagagagtactgtgatgac
atcaagaggaaaaacaagcctattattttgtcacaccacatgttacccggtttacaacaa
ggtcaggagaagatgtcgaaaagtgatccacaatcttccatttttatggaagatgacgag
gccgaagtgaatttgaagataaagagagcatactgtcctccagatattgtggaagggaat
ccatgcttggagtatgtgaagtacctcattttaccttggtttaaaaagtttgtaatagag
cgcagtgcagagaatggtggtgataagagcttcgaaaattttgaagaattggttgcttac
tatgaaagtggaaagctacatccagctgatcttaaaccagccttggcaaaggctttgaat
aagatactagagcctgtaagagaacacttcaagaatgacaaagatgcaaaagatcttttg
aaaagggttaaggcttacagagtcacaaggtaa
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