Castanea sativa (European chestnut): 142617252
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Entry
142617252 CDS
T11266
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa00040
Pentose and glucuronate interconversions
csaa01100
Metabolic pathways
Module
csaa_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142617252
Enzymes [BR:
csaa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
142617252
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
142617252
NCBI-ProteinID:
XP_075646145
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Position
11:complement(65668138..65673210)
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AA seq
449 aa
AA seq
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MSQQSQFLTLFIILASFSTCFSSYKEDPHANNGGPDPIAHTTSMGTINEGNKHEPRFMDF
MKSQTKRFGLKTRLSSAGTSQKLVNVDDFGAKANGGDDTEAFRKAWKVACSSANSALVVP
ANKNYHLKPITFSGPCKPYFTMKVYGTIKASSHKSDYEKDTLHWLVFEKLQDFVVEGGGT
INGNGRIWWESSCKINDKLPCKHAPTAVTFQDSKNVRVSSIRIKNAQQMHLIFQNCQNVK
ALNLVVTAPGNSPNTDGIHVTGTQNIQIQNCVIRTGDDCISIVSGSKNVQATDITCGPGH
GISIGSLGAGNSEAEVSNVMVNRAKLTGTTNGMRIKTWQGGSGYAKNIIFQNVVMNNVSN
PIIIDQNYCDQKSPCQQQPSAVKISNVSYKNIKGTSASEEAITFNCSKSFPCQGVLLQDV
NLVRQGNGDVDATCLKVRLSKKGNVSPGC
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaacaaagccaatttcttacacttttcataatcctagcctctttctcaacctgc
tttagcagttacaaagaggacccacatgctaataatggaggtcctgatcctatagcccac
actacatcaatgggcaccattaacgagggtaataaacatgagccaaggttcatggacttc
atgaagtctcagaccaaaaggtttggtctcaaaacaaggcttagcagtgcaggcacttca
caaaagctggttaatgtagatgactttggagctaaagctaatggaggagatgatactgag
gcatttaggaaagcttggaaggtggcttgttcttctgcaaatagcgctcttgtggttcct
gcaaataagaactatcatcttaagccaattactttctcaggtccttgcaaaccatacttt
acaatgaaggtctatggaacaattaaagcttcttctcacaaatcagattatgaaaaagat
acactacattggcttgtgtttgagaaacttcaagatttcgtagttgaaggtggcggcacc
atcaatggcaatgggaggatatggtgggaaagctcatgcaagatcaacgataaacttcct
tgcaagcatgcaccaactgctgtgactttccaagatagcaagaatgtgagagtgtccagc
ataaggataaaaaatgcacagcaaatgcatcttatttttcagaattgtcaaaatgtcaaa
gctttgaatcttgtggtgactgcaccaggcaatagccccaataccgatggaattcatgtc
acaggaacgcaaaacattcaaatacagaactgtgtcatcaggacaggtgatgactgtatt
tcaattgtaagtgggtctaaaaatgttcaagccacggatattacctgtggaccaggacat
ggaatcagcattggtagcttaggagctggtaattcagaagcagaagtttctaatgtcatg
gtgaatagagcaaaactcacaggaaccacaaatgggatgagaataaagacttggcaggga
ggctctgggtatgcaaaaaacatcatatttcaaaatgtggttatgaacaatgtcagcaat
cctataatcatagaccaaaactattgtgatcaaaaatcaccatgccaacaacagccctca
gctgtgaaaataagcaatgtgtcttacaagaacatcaaaggcactagtgcatcagaagag
gccataacattcaattgcagcaagagctttccttgtcaaggggttttgttgcaagatgtt
aatctggtacgccaaggcaatggagatgtcgatgctacttgtctgaaagttcgattgtca
aaaaaggggaatgtctctccagggtgctga
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