Castanea sativa (European chestnut): 142617294
Help
Entry
142617294 CDS
T11266
Name
(RefSeq) serine/arginine-rich splicing factor SR30-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142617294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csaa03041
]
142617294
Spliceosome [BR:
csaa03041
]
Common components
Common spliceosomal components
SR proteins
142617294
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
142617294
NCBI-ProteinID:
XP_075646193
LinkDB
All DBs
Position
11:complement(17593900..>17596917)
Genome browser
AA seq
269 aa
AA seq
DB search
FNRSLSLALYLALALSLLLSHRSWQLIFLLFSRQPNRFSTQFFYYSPSDQYGPIVDIDLK
LPPRPPSYAFIEYEDSSDAEDEIYYRDGYNFDGYRLRVELAHGGRGNSSSADHHGSYGGS
GSSRAAPKHSDYRVMCCLQYISFQLYKVFCDVLFSQVFCDRGGMTRIVDYAHYDDMKYAI
KKLDDSEFWNVFSRSYVWVREYDSRWSYSRSRSCDSRQSYSRSPYMSRSPSRSCSYSGRS
ESISPKRKYSRPSPSVSGSRSILFLCLPH
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
ttcaatcgctccctctctcttgctctatatctcgctcttgctctctcgcttttgctctct
cataggtcttggcagttgattttcctattattttctaggcaaccaaacagattctcgact
caatttttctattattctccctctgatcagtatgggcctattgttgacattgatctgaag
ctccccccaagacccccaagctatgcttttattgagtatgaagattctagtgatgctgaa
gatgaaatttattaccgggatggttacaactttgatggttatcgcttacgagttgaactt
gcacatggtgggcgaggaaattcgtcatcagcagatcatcatggcagttatggtggtagt
ggcagtagccgagctgctcccaagcattctgactatcgtgttatgtgttgccttcaatac
atctcttttcagttatacaaagtattctgtgatgtccttttctctcaagtattctgtgac
cgtggtggcatgacaagaattgtggattacgcacactatgatgacatgaagtatgcaatc
aaaaaacttgatgattctgaattttggaatgttttttctcggtcttacgtatgggtgaga
gagtatgattcgaggtggagttactctagaagtcgcagctgtgattcaagacagagctac
tctagaagtccttacatgtcgagaagccctagtcgtagctgtagctatagtggaaggagt
gagagcatatctccaaagagaaaatattcacgtccatctccatcagtctctggttcaagg
tctattttgtttctctgtcttcctcattag
DBGET
integrated database retrieval system
