Castanea sativa (European chestnut): 142617302
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Entry
142617302 CDS
T11266
Name
(RefSeq) retinoblastoma-related protein
KO
K04681
retinoblastoma-like protein 1
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csaa03000
]
142617302
Transcription factors [BR:
csaa03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
142617302
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Ortholog
Paralog
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
TERT_C
KefB_C
Motif
Other DBs
NCBI-GeneID:
142617302
NCBI-ProteinID:
XP_075646203
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All DBs
Position
11:57504066..57512810
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AA seq
1036 aa
AA seq
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MSPAALEKMEDAKPSEAASANNSQTDSAAATVDPSEARFSEFCKNGMSLDENTCTQAMKL
FKETKHLLQTNVSSFGNGTLDEAERFWFAFVLFSVKRLNEKNGDSEQQGSDDNGCTLCQI
LRAAKLNIVDFFKELPQFVVKAGPTLSNVYGADWENRLEAKEMQANFVHLSLLSQSYKRA
IREFFLTTEANVDKQSAVASASGYVSDYHRFGWLLFLALRVHAFSRFKDLVTCMNGLVSI
LAILIIHVPVRFRNFKFDDSQLFVKKDGKGVDILASLCNKYQTSEDELRKIMEKANNLIA
DILSKKPQPASECRIGNLENIDTDGLTYFQDLLEESSLSSSLGILEKDYDGAIRGKVVLD
ERVFINDEDSLLGSGSLSGGSVNISGVKRKFDSIASPAKTITSPLSPQRSPASHANGNMG
VSNSKMVATPVSTAMTTAKWLRTVISPLPPKPSAELKRFLASCDRDLTEEVDTRAKIILF
ATFPSTAQGEHCMSTNLQSANLMDSIWAEQRKFEALKLYYRVLEAICRAEAQILHASNLT
ALLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLP
RELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPNLSAEINRLGLLAEPMPPLDAICMH
INMNSKFISGGVPHFPSLQKHETSPGQNGDIRSPKRSCPDYRSVLVERNSFTSPVKERLL
ANLKSKPLPPPPLQSAFASPTRPNPSGGGETCAETEINIFFSKITKLAAVRINGMVERLQ
QSQQIRENVYCLFQQILSQRTSLFFNHHIDQIILCCFYGVAKISQLNLTFREIIYNYRKQ
PQCKPQVFRSVFVDWSSARRNGKTGPDHVDIITFYNEIFIPAVKPLLVELGPAGATTKTN
RVPEVHNNNDAQCPGSPKISPFPSLPDMSPKKVSATHNVYVSPLRSSKMDALISHSSKSY
YACVGESTHAYQSPSKDLTAINNRLNGTRKLRGTLNFDDVDVGLVSDSMVANSLYLQNGS
CASSSGAPLKSEQPDS
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgagtccagctgcattggagaagatggaagatgctaagccttcggaagcagcatcggcc
aacaattcacaaacagatagcgcggcggctactgtcgacccatctgaagctcgattctcc
gagttctgcaagaatggaatgtcgttggatgagaacacttgcacgcaagctatgaagctg
ttcaaagagaccaaacaccttctacagactaatgtttcatcttttggcaacggaacgctt
gatgaagcagaaagattttggtttgcttttgttctgttttctgttaaaaggctaaatgag
aagaatggggatagtgagcagcaagggtctgatgataatggatgtacgttatgccagata
ttgagagctgcaaagctgaacattgtggacttcttcaaggagcttcctcagtttgttgtc
aaggctggtccaactttgagtaatgtatatggtgcagattgggagaatagacttgaggca
aaagagatgcaggctaattttgtgcacttgagtctactaagccagtcctacaaacgtgca
atccgggaatttttcttgacaactgaagcaaatgttgataagcagtccgctgttgctagt
gcatctggctatgtctcagactaccaccgttttggatggttgctttttctggcactccgt
gtacatgcgttcagccgttttaaggacttggtgacttgcatgaatggtttggtttccata
ttggctatcttaattattcatgttcctgttcgcttcagaaatttcaaatttgatgattct
caactatttgttaagaaagatggcaaaggtgtagacatcctcgcatcactttgcaacaaa
tatcaaacatcagaagatgagttgaggaaaataatggaaaaggccaataatttaatagca
gatattttgagtaaaaagccacaaccagcatctgagtgtagaattggaaacttggagaat
atcgacacagatggtttgacatattttcaagatctactggaggaatcatctttgtcatcc
agtttaggtattttagaaaaggattatgatggggcaattcgtggtaaggtcgtactggat
gagagggttttcattaatgatgaggacagcttacttggttcagggagcttgtcaggaggt
tctgtgaatataagtggtgtgaagaggaaatttgattcaatagcctcacctgctaagacg
atcacaagtccactctctcctcagcgctctcctgcatctcatgcaaatggaaatatgggg
gtttctaattcaaagatggtagctacgcctgtaagcacagcaatgacaactgcaaagtgg
cttcgtactgtcatttcaccacttccaccaaagccctcagcagagctgaagcgtttcctg
gcatcttgtgatagggatttaactgaggaagtagatacaagggcaaaaataatattgttt
gctacatttccaagtactgctcagggagagcattgtatgtctacaaacctgcaatctgca
aatctcatggacagcatctgggcagaacaacggaaatttgaagcactcaagttatattat
agggtattggaagcaatttgtagagcagaggcccaaatactgcatgcaagtaatttgaca
gcgctattgactaatgagaggttccatagatgtatgctcgcctgttctgctgaactagtt
ctggcaacacataagactgttacaatgttgtttcctgcggtgctggagaggactggcatt
acagcttttgatcttagcaaggtcatcgaaagtttcattagacatgaggaatccctccca
agagaattgaggcggcatctgaattcattagaagaacgacttttggagagtatggtatgg
gaaaagggttcctccatgtataattctttgacagtagcaaggcctaacctctccgcagaa
ataaaccgtcttggactattggcagaaccaatgccacctttggatgcaatttgcatgcac
attaacatgaattctaaatttatttctggaggggttcctcacttcccttctttgcagaag
catgagacttcaccaggccagaatggggatatcagatccccaaagagatcgtgcccggac
tatcggagtgtattagtggagcggaattcctttacatcaccagtcaaggaacgcctcctg
gccaaccttaaatcaaagccgctgccaccacctcctttgcagtcagcatttgctagtcca
acacggccaaatccaagtggtggaggggagacgtgtgcagaaactgaaatcaatatattc
tttagcaagattactaagttggctgctgtcagaatcaatggtatggttgaaaggctacaa
cagtctcagcagattagggagaatgtctattgtctttttcaacaaatactaagtcagcgg
acgtctctattttttaaccatcacattgaccaaatcatcctttgttgtttctatggagtt
gcaaagatatctcaactcaatctgacctttagggaaattatttacaactataggaagcaa
ccacaatgtaaacctcaagtttttcgcagtgtgtttgttgattggtcatctgcacggcgc
aatgggaaaacaggaccagatcatgttgatatcattacattttacaatgaaatttttatc
cccgctgtaaagcctctgctggttgagcttggccctgctggagcaactacaaaaactaac
cgagttcctgaagtccacaataataatgatgctcaatgtcctggatcgcctaaaatatct
ccttttccaagtctccctgatatgtctccgaagaaagtatcagctacacacaatgtgtac
gtctctccattgcgatcatccaagatggatgctctgatatcacatagctcgaaaagctat
tatgcttgcgttggagagagtactcatgcatatcagagcccttcaaaagacctgactgcc
atcaataaccgcttgaatggtacccggaaacttagaggcaccctaaacttcgacgatgtt
gacgttggcttggttagtgattctatggttgccaacagcctctaccttcaaaatgggagt
tgtgcatcctcatcaggtgcaccactgaaatctgagcaacctgactcctga
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integrated database retrieval system