Castanea sativa (European chestnut): 142617345
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Entry
142617345 CDS
T11266
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csaa03041
]
142617345
Spliceosome [BR:
csaa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
142617345
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
RRM_ACIN1
RRM_10
DUF4523
DUF8400
Motif
Other DBs
NCBI-GeneID:
142617345
NCBI-ProteinID:
XP_075646266
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All DBs
Position
1:complement(73181807..73189770)
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AA seq
493 aa
AA seq
DB search
MSTSGQPQFRYTQTPSKVLHLRNLPWECTEEELIELCKPFGKIVNTKCNVGANRNQAFVE
FGDLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDVPGNVLLVTIEGVE
AGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFSDAETASAARNALNERSIPRYLL
PEHVNSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGIVQPAVGPDGKKKEL
ESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALVQYPDVNTAAIARE
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPDISLLAAQQASALPAAQPVW
QSPQAGPMYTGNDFTAPGAGPTQYPGGQVAPWDHSMQAGRPPFVSAPSTYPGQSYAASSV
SSYASAPMPSSSSPHTPTSQIPSPGASMGLSPGVQANLRPGGVSSPSHLQQGVSPNVRPG
GASPPGQPAYYGQ
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacctccgggcagccccagttccggtacacccagaccccatcaaaggtcctccat
ctccgcaatctcccatgggagtgcactgaggaggagctcatcgagctctgtaaacccttc
ggcaagatcgtcaacaccaagtgcaacgtcggcgctaatcgcaaccaggccttcgtcgaa
ttcggtgatttaaatcaagcaatatcaatggtttcatattacgcatcatcttcagagcct
gcacaagttcgtggtaaaactgtgtatattcaatattcaaatagacatgaaattgtcaac
aacaaaagtcccggagatgttcccggaaatgtcttattggtaaccatcgagggtgtagag
gctggcgacgttagcattgacgttattcacttggtattttcggcatttggctttgtgcat
aaaattgctacttttgagaaggctgcaggtttccaggcattaatccagttctctgatgct
gagactgcatctgcagcaaggaatgcattaaatgaaagaagcatacccaggtatctgctt
ccagagcatgttaattcatgtcacttgcgtatttcatattctgcacacactgatctgaac
atcaagttccagtctcacagaagcagggactatacaaatccataccttcctgtgaatcct
actgcaattgagggaattgtgcagcctgcagtagggcctgatggaaaaaagaaagaactt
gagagcaatgtgcttcttgcttcaattgagaacatgcagtatgctgtcactgtggatgtt
cttcacacggtattctctgcatttggtactgttcagaaaattgctatatttgagaagaat
ggtcaaactcaggcactcgtccaatatcctgatgttaatactgcagcaattgccagagaa
gctttagaaggacattgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgtgaaggcttacagtgataaaagtagagattatacaatccca
gatataagtttgcttgcagcacaacaagcgtcagctctccctgctgctcaaccagtttgg
caaagtcctcaggctggtccaatgtatactgggaatgattttacagctcctggtgctggt
cctactcagtatcctggtggacaggtagcaccatgggatcatagcatgcaagcgggcaga
cctccatttgtttcggctcctagcacttatcctggccaaagttatgcagcatcctcagtt
tcttcgtatgcctctgcaccgatgccatctagttcttcccctcatacaccaaccagccaa
attccttctcctggggcatccatgggattatctcccggggttcaagccaatttgcgaccc
ggtggcgtttcatctcccagtcatcttcaacaaggggtttctccaaatgtgcgacctggt
ggtgcttcacctcctggtcagcctgcatattatggccaatag
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