Castanea sativa (European chestnut): 142617593
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Entry
142617593 CDS
T11266
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 36
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csaa03009
]
142617593
Enzymes [BR:
csaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
142617593
Ribosome biogenesis [BR:
csaa03009
]
Eukaryotic type
90S particles
Helicases
142617593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
142617593
NCBI-ProteinID:
XP_075646612
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All DBs
Position
11:complement(6280480..6290662)
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AA seq
499 aa
AA seq
DB search
MDQDALVDKNFPLFSKPTKRSKPIATTSTSTSTSTTAHNIEANTPHIEKSTNLDHDTTTT
TAAATFANLGLAEWAVQTCKELGMHKPTPVQTHCIPKILAGRDVLGLAQTGSGKTAAFAL
PILHRLAEDPFGIFGLVVTPTRELAYQLAEQFRALGSCLHLRCTVVVGGMDMLNQAKTLM
TRPHLVIATPGRIKVLLEENPDIPPLFSNARFLVLDEADRVLDVGFEEELRVVFKCLPKN
RQTLLFSATMTSELEALLELSANKAYFYEAYEGFKTVATLKQQYIFIPNNVKDVYLMHIL
SKMEDMGVRSAIIFVSTCRSCHLLSLLLEELDQEVAALHSFKSQSLRLAALHRFKSGQVP
VLLATDVASRGLDIPTVDLVVNYDIPRYTRDYTHRVGRTARAGRGGLAVSFVTENDVALI
HEIEADIGKQLEAFECKENEVLSDITKVYKAKRVAVMKMMDDGFDEKEKERKKQKLKTLA
EKGLLKKRSKKRKRDKSIK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagatgctttagttgacaagaacttccccctattttcgaaacccaccaaacgc
tctaaaccaattgccacaaccagcaccagcaccagcaccagcaccactgcccacaacatt
gaggcaaacaccccacatatcgaaaaatcaacaaaccttgaccatgatactaccaccacc
accgccgccgccacatttgccaaccttggcctcgctgagtgggcagtgcagacctgcaaa
gagctcggaatgcacaaacccacaccggtgcaaacccactgcataccaaaaatccttgca
ggccgtgatgtactcggtcttgcacagactggcagtggcaagactgctgcatttgcattg
cctatcctgcaccgcctggctgaagatccctttggcatctttgggctggtggtgacacca
acgagggagcttgcataccagttggctgagcagtttagggcgcttgggtcatgcttgcat
ttgcggtgtactgtggtggttggaggaatggacatgctgaaccaggcaaagactttgatg
acgaggccacatttggtgattgcaactccagggaggatcaaggtcttgctggaagaaaat
cctgatattcctcccttgttctccaatgctaggttcttagttttggatgaagcagataga
gttctggatgttggatttgaagaggaattaagggtggtctttaagtgtttgccaaaaaat
cggcaaactctattattttctgcaacaatgacaagtgaactggaagcactgcttgagctt
tctgcaaataaggcatacttctacgaggcatacgaaggctttaagacagttgccactcta
aaacagcagtatatttttattcctaacaatgtgaaggacgtttatctaatgcacattttg
tctaaaatggaagatatgggtgttcggtccgccatcatatttgtctccacctgcagaagc
tgtcaccttttgagtttattactggaagagcttgatcaggaagtagcagcattacattct
tttaaatctcagtctctaaggcttgctgctctacatcgattcaaatctggacaagttcct
gtattgcttgcaactgatgttgccagccgtggtttggacattcctacagttgatcttgtt
gtaaattatgatattcctaggtacactagagattatacccatcgtgtggggcgtacggca
agagcaggcagaggagggctggctgtgagctttgttaccgagaatgatgttgctctcatt
catgaaatagaagctgatattggaaaacagttggaagcatttgaatgtaaagagaatgag
gtgctttctgatattacaaaggtttacaaggccaaacgcgtggcagtgatgaagatgatg
gatgatggctttgacgagaaagaaaaagaacgcaagaaacaaaaattgaaaactctagca
gagaaaggattgttgaagaaaaggagtaaaaagagaaaaagagataaatctattaaatag
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