Castanea sativa (European chestnut): 142617677
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Entry
142617677 CDS
T11266
Name
(RefSeq) putative RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142617677
03036 Chromosome and associated proteins [BR:
csaa03036
]
142617677
Enzymes [BR:
csaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
142617677
Messenger RNA biogenesis [BR:
csaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
142617677
Chromosome and associated proteins [BR:
csaa03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
142617677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MOV-10_beta-barrel
AAA_11
Motif
Other DBs
NCBI-GeneID:
142617677
NCBI-ProteinID:
XP_075646744
LinkDB
All DBs
Position
11:complement(11473994..11477503)
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AA seq
613 aa
AA seq
DB search
MWFLRQIFELVSGFLKSSNESPGKSNSATDKPKHVNQPTFSSTPLQSPSKPPSSESSSPL
AHAFSSRPSTSSSNLSPSPSSLKPPVASFRSYASVLKTPSASSSPTSKTPPQSSSSVVPN
SSTLGPRQTSTKQPPAFKPFLHTVPNNVTNEEGKMSYMYEKGTPLYATPEDIKGQIKRDI
VPQVLKQPLSPSTYKDFFAALLYAEDYYLEKWADFLLEKVTLKMEKATVYKEKNEHKYSD
GTDEKDDKIFVAFEIDSVPQRRPFLLSRDMVYAQPSDKEVEAFQGFIYRVVKSNCMLVEF
GEDFHSQHHPNRKYDISFSFNRVCLKRAHQAVDTAIEPSSHNFIFPECVSWKNNVNPPLF
DAYHELDIDELRAVRRILSYPGSPPYLLVGPLIGTEVERYVPELKASARTGVVVCEAVIE
IYKTSEENRVLICAPINRTCDALMTRLMEVIPESDMFRANAAFREMDLVPDDILRSCPVK
DECFKCPPLPILQEFKIILSTYVSSFRLYNEGVAAGHFSHIFLVDASSTTEPEATIALAN
FANENTSVIVTGAPRNHSGWVRSNMARNYGLRKSYFERLREREPYKNLNPMFITELDDYE
QQPDGNHSSMSFY
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtggtttcttcgtcaaatcttcgaactagtctctgggttcttgaaatcttcgaacgag
tctccggggaaaagtaattccgcgacagacaagccaaaacatgtaaaccaacccacattt
tcttctacaccacttcagtctccatctaaaccacccagttctgaaagttcaagtccattg
gcacatgcattttcttctagaccatccacatcttcctcaaacctatcaccatctccatca
tcccttaaacctccagttgcttcttttagatcatatgcatctgtccttaagaccccatca
gcttcttcttctccaacttccaaaacaccacctcaatcttcatcgtcagtggtcccaaat
tcatctaccttggggcctcgtcagacttccactaagcagcctccagcttttaaaccattt
ctgcatacagttcccaataatgtaacaaatgaagaagggaagatgagttatatgtatgaa
aagggtacacccttatatgctactcctgaggatatcaaaggtcagatcaagagagacatt
gtgcctcaagttttgaaacagcctttatctccttcaacttataaggatttttttgctgct
ctgttatatgctgaggattactacttggagaaatgggctgatttcctattggagaaagtg
actttgaagatggagaaagcaacagtttataaggaaaaaaacgagcataaatattctgat
ggaactgatgagaaggatgataaaatctttgtagcatttgagattgattctgttcctcag
aggcggccattccttttatcaagggacatggtctatgctcaaccttcggataaagaggtt
gaggcctttcagggttttatctatcgtgtggtgaaaagcaattgcatgttagttgaattt
ggagaagattttcattcacagcatcatccaaatcgcaaatatgacatcagcttctcattc
aacagagtttgtctgaaaagggctcatcaagctgttgatactgcaatagaaccttcatca
cataacttcatctttcctgaatgtgtctcttggaagaacaatgttaacccacctctgttt
gatgcctatcatgaacttgatatagatgagctccgtgcagttcgtcggattctaagctat
ccgggctcaccaccttatcttcttgtgggcccgctcattggcactgaagtggaaaggtat
gtacctgaactaaaagcatcagcaagaacaggggtggttgtttgtgaagctgtaattgaa
atatataaaacctctgaagagaatcgggttcttatatgtgcacctataaaccgcacatgc
gatgcgctaatgacgaggttgatggaggtgattccagagtcagatatgtttagagccaat
gctgcatttcgagagatggatctagtacccgatgacattctgcgctcatgtcctgtaaaa
gatgaatgtttcaaatgtcctccactcccaatacttcaggaattcaagataattttgtca
acttatgtgagtagctttcgactatacaatgaaggcgtagctgctggacattttagtcat
atttttctagtggatgcctcatcaaccacagagccggaggcaacaatagctttggctaat
tttgctaatgagaatacgtctgttattgttactggtgcacccagaaaccattcaggttgg
gtccgctctaacatggctaggaattatgggttgaggaagtcatattttgaaagacttcgt
gaacgggagccatataaaaaccttaatccaatgttcattacagagctggatgactatgag
caacagccagatggcaaccatagctccatgtcattttattga
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