Castanea sativa (European chestnut): 142617931
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Entry
142617931 CDS
T11266
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142617931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csaa04121
]
142617931
Enzymes [BR:
csaa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142617931
Ubiquitin system [BR:
csaa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
142617931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
PHD_4
Motif
Other DBs
NCBI-GeneID:
142617931
NCBI-ProteinID:
XP_075647024
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All DBs
Position
1:29247966..29251194
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AA seq
314 aa
AA seq
DB search
MERDSFECVSSLDGIYEEEIHQHLQFSSLVKSQNNVVVQENSPTSVHELLECPVCTNSMY
PPIHQCHNGHTLCSTCKTRVQNRCPTCRQELGDIRCLALEKVAESLELPCKYDFLGCIEI
FPYYSKLKHEAQCNFRPYNCPYAGSECPAVGDIPFLITHLRDDHKVDMHSGCTFNHRYVK
SNPREVENATWMLTVFNCFGQYFCLHFEAFLLGAAPVYMAFLRFMGDETESRNYSYSLEV
GAHGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRICKEQ
QNPDGGVCIPNVCS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggaaagggatagctttgaatgtgtgtcatctttggatggcatctatgaggaagagata
catcagcaccttcaattctcgtccttagtgaagtcacagaacaatgtggtcgtgcaggaa
aactctccaaccagcgtccatgaacttctcgaatgtcctgtctgtaccaattctatgtac
cctccaattcaccagtgccataatggacatacactgtgttctacttgtaaaacgagggta
caaaaccggtgccccacttgtagacaagagcttggagatattaggtgtctggcattggag
aaggtggcagagtcacttgaacttccctgcaagtacgacttcttgggatgcattgagatt
ttcccctactacagcaaacttaagcatgaggctcagtgtaactttagaccatacaattgc
ccatatgctggatctgagtgtcctgctgttggagatatcccttttctgataacccatctg
cgggacgatcacaaggtagacatgcactctggctgcacattcaatcaccgctatgtcaag
tctaatccccgtgaagtagagaatgcaacctggatgcttacagtttttaattgttttggc
caatacttctgcctgcactttgaggccttcctgcttggtgcagccccagtttacatggca
ttccttcgtttcatgggtgatgagactgagtcccggaactacagctacagtttagaggta
ggggcacatggcaggaaactgatatgggaaggcacccctcgaagcattcgggatagccat
aggaaggttagggacagtcatgatggcctaataatccagcgtaacatggcactttttttc
tctggtggagagcgaaaggagctaaagcttcggattacaggacgtatctgtaaggaacaa
cagaatccagatggaggggtgtgcatacccaatgtttgcagttga
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