KEGG   Castanea sativa (European chestnut): 142618000
Entry
142618000         CDS       T11266                                 
Name
(RefSeq) protein mago nashi homolog
  KO
K12877  protein mago nashi
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa03013  Nucleocytoplasmic transport
csaa03015  mRNA surveillance pathway
csaa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    142618000
  09122 Translation
   03013 Nucleocytoplasmic transport
    142618000
   03015 mRNA surveillance pathway
    142618000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csaa03019]
    142618000
   03041 Spliceosome [BR:csaa03041]
    142618000
Messenger RNA biogenesis [BR:csaa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     142618000
Spliceosome [BR:csaa03041]
 Complex C
  Other components
   EJC/TREX
    142618000
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-GeneID: 142618000
NCBI-ProteinID: XP_075647094
LinkDB
Position
11:51992654..51997345
AA seq 155 aa
MAGVVGGEEELEEFYVRYYVGHKGKFGHEFLEFEFRSNGMLRYANNSNYKNDTMIRKEVY
VTPAVLKECRRIILESEILKEDDNQWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQ
SSNDPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
NT seq 468 nt   +upstreamnt  +downstreamnt
atggcaggagtggtgggaggagaggaagagttggaggagttttacgtgaggtactacgta
gggcacaaggggaagttcgggcacgagttcttggagttcgagttccgctccaatggcatg
cttcgctacgccaacaactccaactacaagaacgacaccatgattcgcaaggaggtctac
gtcacccccgccgtcctcaaagagtgtcgccgcatcatcctcgagagcgagattctaaag
gaagatgataaccaatggccagaacccgaccgcgttgggaggcaggagcttgagattgtg
atggggaacgagcatatttcttttactacttcaaagattggatcccttgttgatgtgcag
agcagtaacgaccctgaagggcttcgcatattctattaccttgttcaggacctgaagtgc
ttcgtattctctctcatttcactccatttcaagatcaagccaatttaa

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