Castanea sativa (European chestnut): 142618257
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Entry
142618257 CDS
T11266
Name
(RefSeq) putative pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa00040
Pentose and glucuronate interconversions
csaa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
142618257
Enzymes [BR:
csaa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
142618257
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
DUF5667
Motif
Other DBs
NCBI-GeneID:
142618257
NCBI-ProteinID:
XP_075647278
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Position
12:complement(41839491..41845361)
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AA seq
445 aa
AA seq
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MAFSVRWFSIASLLVITMLLTSVKASTEKDQQLVHSRLAEAEELLSSKNASMANRSDNAL
NEHAVNNPEEIASMVDMSIRNRTEGRKLGYFSCGTGNPIDDCWRCDPQWQLHRKRLADCA
IGFGRNAVGGRDGKYYVVTDSSDDDAVNPKPGTLRHAVIQDRPLWIVFKRDMVITLKQEL
IMNSFKTIDGRGVNVHIANGACITIQYVTNIIIHGLHIHDCKSTGNAMVRSSPSHYGWRT
MADGDGVSLFGASHVWVDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDS
YTNDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGN
RYLAPVNPFAKEVTKRVNTDTGVWKGWNWRSEGDLLLNGAYFTPSGAGAAASYARASSLG
AKSSSMVGTITSDSGVLNCRRGHPC
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcattctctgtgagatggttcagtatagcctcattgctggttatcaccatgctttta
acaagcgtgaaggcctccacagagaaagaccagcagcttgtacactcaaggcttgcagag
gcggaggaattgcttagctccaagaatgcatcaatggcaaacaggtcagataatgctttg
aatgagcacgctgttaataatccagaggagatagcttctatggttgatatgagcattcgt
aatagaactgaaggaaggaaattgggatatttttcatgtggaactgggaatccaattgat
gactgctggcgttgtgacccacagtggcaactccacagaaagcgtctagccgattgtgct
attggattcggacgcaatgccgttggcggccgcgacggaaaatactacgtggttactgac
tccagcgatgatgacgccgtgaatcctaaacccgggactctccgccatgctgtgattcag
gataggccattgtggattgtgttcaagagggacatggtgatcacacttaagcaagagctg
attatgaacagctttaagactattgatggtcgaggtgtcaatgttcacattgctaatggg
gcttgcatcacaattcaatacgtcacaaatatcattattcatggtctacatatccatgat
tgcaagtcaactggcaatgctatggttcggagctcaccaagtcattatggttggagaaca
atggctgatggagatggtgtttcgctttttggtgcaagccatgtttgggttgaccacaat
tcactctctaattgtgctgatggccttattgatgctattatgggctctacggctattacc
atctctaataactacttcacccatcacaatgaggtaatgctattgggtcatagtgactcc
tacacaaatgataagcagatgcaagtgacaattgcctacaaccattttggtgaaggtcta
atccagagaatgccaaggtgtaggcatgggtacttccacgtggtaaacaatgactacaca
cattgggaaatgtatgccattggtggaagcgctgaacccaccattaacagccaaggcaat
agatatcttgcccctgtcaacccttttgctaaggaggtgacaaagagggttaatacagac
acaggtgtatggaagggctggaattggaggtcagagggagaccttttgctgaatggagcc
tacttcactccatcaggagcaggagctgcagccagttatgccagggcctcaagtttaggg
gccaagtcctcttccatggttggaaccattacttctgattctggggtccttaattgccgc
aggggccacccgtgttaa
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