Castanea sativa (European chestnut): 142618258
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Entry
142618258 CDS
T11266
Name
(RefSeq) transcription factor IIIA isoform X1
KO
K09191
general transcription factor IIIA
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csaa03000
]
142618258
03021 Transcription machinery [BR:
csaa03021
]
142618258
Transcription factors [BR:
csaa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
142618258
Transcription machinery [BR:
csaa03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
142618258
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-met
zf-H2C2_2
zf_C2H2_ZNF292
zf-C2H2_11
zf-C2H2_8
Motif
Other DBs
NCBI-GeneID:
142618258
NCBI-ProteinID:
XP_075647279
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All DBs
Position
12:4029996..4033500
Genome browser
AA seq
378 aa
AA seq
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MSDLLSEMDEMGEIEKPIFRDIRRYYCEYCGICRSKKSLITSHMLTHHKEEMEKNRVNGE
EDKEGKKSNTCQECGATFTKPAYLKQHMQSHSVERLYTCPVDDCHSSYRRKDHLTRHLLQ
HQGKLFKCPIENCGHEFSYQGNMTRHVKEFHSKDCPPINAEPQKQFVCQEIGCGKVFKFA
SKLRKHEESHVKLDSVEALCCEPGCMKYFSNDECLKAHIQSCHQHITCEICGTKQLRRNI
KRHLQIHEDTVSLERVKCHYDGCLHTFSTKSNLYQHIKAVHLELKPFACSFSGCGVRFAH
KHVRDKHEKTGCHVHTTGDFEESDEQFQSRIRGGRKRKCPTIEMLIRKRVSPPSPPSQSD
EESDYLGWLHSQRTGNEL
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatctgttatcagagatggatgagatgggtgagattgagaagccaatattcaga
gacataaggcgttattactgtgagtactgtggcatttgcaggtccaagaagtctcttatt
acttctcatatgctcactcaccacaaggaagagatggaaaagaatcgggttaatggggaa
gaggataaagaaggaaaaaagtccaatacgtgtcaagaatgtggtgcgacattcacaaaa
cctgcgtatttgaagcaacacatgcaaagtcactcggttgagaggctgtacacctgtcca
gttgatgattgccattccagctatagaagaaaggaccacttgactcggcatctgcttcag
caccaaggaaaactctttaagtgtccaattgagaactgtggccatgaattttcttaccaa
gggaacatgacacggcatgtgaaagaattccatagcaaggattgccccccaattaatgct
gaaccccagaagcaatttgtctgccaggagatagggtgtggaaaggttttcaaatttgca
tcaaaactgcgaaagcatgaggaatcccatgttaaattagactcagtggaggcactctgc
tgcgaacctggctgtatgaaatatttttctaacgatgaatgccttaaggcccacatccag
tcctgccaccaacatattacttgtgagatatgtgggaccaagcaactgagaaggaacatt
aagcggcatctacaaatacatgaagacacagtttctttggagagagtcaaatgccactac
gatggttgtcttcacacattttcaactaaatcaaatctctatcagcatatcaaggctgtg
caccttgaacttaaaccttttgcctgtagcttttctggttgtggcgtgagatttgcacac
aagcatgtgagagacaagcatgagaagacggggtgccacgttcatacaaccggtgatttt
gaagagtcagacgagcaatttcaatccaggattaggggtggccggaagagaaagtgccca
accatagaaatgctgatccggaagagggtttctccaccaagtccaccaagtcaatcagat
gaagagtctgactaccttggttggttgcactcacagaggactggcaacgagctgtaa
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