Castanea sativa (European chestnut): 142618346
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Entry
142618346 CDS
T11266
Name
(RefSeq) 25.3 kDa vesicle transport protein SEC22-1-like
KO
K08517
vesicle transport protein SEC22
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04130
SNARE interactions in vesicular transport
csaa04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
142618346
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
142618346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csaa04131
]
142618346
Membrane trafficking [BR:
csaa04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
142618346
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Gene cluster
GFIT
Motif
Pfam:
Longin
Motif
Other DBs
NCBI-GeneID:
142618346
NCBI-ProteinID:
XP_075647382
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Position
12:13010398..13012016
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AA seq
218 aa
AA seq
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MVKLTIVGRVSDGLPLAQGPRYMIEDYNKFLFYKQQAELILKEISKGALAHSKMTIHIDH
HSFNHLVDNGIIFITLCDSSYPRKLAFHYLQDLQKEFEKFDNRLVEKITRPYSFVKFDSI
IGNIRRLYINTRTQANLSKLNANRKQDVDIVTKHISEILERRQNAEISDRVFVTPQTASS
IWSSPRREEIALKWTPITTIFVVAVVLLWASLDSQITL
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggttaagctaacgatagttggaagagtgagcgatgggttgcctcttgcacaaggacct
aggtatatgattgaggattataacaaattcttattttacaagcaacaagcagagctcata
ctcaaagaaatctccaaaggagccttggcacattccaagatgaccattcacattgatcat
cactccttcaaccacttggtcgacaatggaatcatcttcatcacattgtgcgattcttca
tatccaagaaaactagctttccattatctacaagatttgcaaaaggagtttgagaagttt
gataatagactcgtagagaaaatcaccagaccatacagctttgtgaagtttgatagcatt
attgggaatatcagaaggctatacataaatacaagaacgcaggccaacctatcaaagctt
aacgctaataggaaacaagatgtagatattgttactaaacacatatctgaaattttagaa
cgaaggcaaaatgctgaaatatcggatcgagtatttgtgactcctcaaactgcgtcctca
atatggagctccccacgccgggaggaaattgccctgaagtggacgcctatcacaacaatt
tttgtggttgctgttgttcttttatgggctagcttggactcacagattacattataa
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