Castanea sativa (European chestnut): 142618446
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Entry
142618446 CDS
T11266
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
142618446
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csaa04040
]
142618446
Ion channels [BR:
csaa04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
142618446
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
142618446
NCBI-ProteinID:
XP_075647501
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Position
12:complement(8383815..8389500)
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AA seq
624 aa
AA seq
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MNNSPNYVCWRSPDCLIDTKEEHFPANNGLHSKEKALLKILHPRDSFLRWWNKIFVVSCV
IAVSLDPLFFYIPVTNEDNKCIRLDKKLRATAFVLRSITDIIHIVHMILQFRTGFIDKAS
RKLGKPVLVKDARTIARRYFWPYFLIDILVILPIPQVVVSVIFSVRGAKYLNTRKLMSSI
LVLQYVPRVLRIYLSWREPMRSARKFAKTPVWVKGLFNFFLYILASHVLGAFWYFFSIQR
EMACWDIACENHPRCVHSSLNCDHSLGNYTFLDDFCPIKTQNTTLFDFGIYLDALQSGVA
ESTDFPQKFFQCFWWGLRNLSSLGQNLQTSNYIWEGCFAIFISIAGLLLFLYLIGNVQTY
MQLATTRSEEIRRKMTLKEIDIELWISKNDLPQNINDEIMQSVKDILEGDKDANVESLLL
NVRKKSNIKRHLCLGMLKRVPRFQNINNQLLQVFLDHLKPVHHSERSYIFREGEPLDAML
FVTQGIAWTYTSSDGNKSECLGKGQFYGEEILEWGFKALSLTDLSNLPISPKTVRCHTKV
EAFALRASDLKTILTQNWWQLSKMLSHITGSNLERWKPLAASSILAAWRRSPRYRAWQRS
HRHHEDVLIKSAQWLTGRELTKFV
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaataactcgccaaactacgtttgttggaggagtccggattgcctgatagatactaag
gaggagcactttccggctaataatggattacattccaaggaaaaggcattactgaaaatt
cttcacccacgggattcattccttcgttggtggaacaaaatatttgtagtgtcgtgtgta
attgcagtatcattggatcctctgttcttttacattcctgtgaccaatgaagataacaag
tgcattaggttagacaaaaagttgagggccacagcttttgttttgagatcaatcactgat
atcattcacatagttcatatgattttgcaatttcgcactggttttatagataaggcctct
cggaaacttggaaaacctgtgttagttaaagatgctaggacaatagctaggaggtatttc
tggccatatttcctgatcgacattctcgttattcttcccatcccacaggtggttgtttca
gtcatcttttcagtgagaggcgcgaaatatttgaatacaagaaagttgatgagctctatt
cttgtccttcaatatgtgccgagagttcttcgaatctacctatcctggagggaacctatg
aggagtgccagaaagttcgctaaaacccctgtatgggttaaaggtttattcaacttcttt
ctgtacatccttgccagccatgtattgggagccttttggtatttcttttcaattcaaaga
gaaatggcttgttgggacatagcctgtgaaaatcatccaagatgtgtccacagttcttta
aactgtgatcacagtttaggaaactacacattcctagatgatttttgccctataaaaaca
caaaatacgacactgtttgattttggaatatatcttgatgcccttcagtcaggtgttgca
gagtccacagactttccacaaaaattctttcagtgtttttggtggggcctgcgaaatcta
agttctcttggccaaaacctccaaacaagtaactatatttgggaaggctgcttcgcaatt
tttatttctattgctggcttgctactatttttatatctcattggaaatgtgcagacatat
atgcagttggcaactacaaggtcggaggagataagaaggaagatgacattgaaagaaata
gatatagaattatggatctcaaagaatgatctccctcagaatataaatgatgagatcatg
cagagtgtaaaagacatactagaaggtgacaaagatgctaatgtagaaagtctgcttctt
aatgttcgcaagaaatctaatataaagcgccatctatgcttgggtatgctgaagagagtt
cccaggtttcaaaacataaataatcaacttttgcaagtgtttctcgaccatctcaagcca
gtgcaccacagtgaacgcagctatatttttcgagagggagaaccactcgatgcaatgctc
tttgtcacgcaaggcattgcatggacctatacaagtagtgatggtaataaaagtgagtgt
cttggtaaaggtcaattctatggtgaagaaattctagaatggggtttcaaagccctctcc
ttaaccgacctatccaacctccccatctcgcccaagactgttagatgccatacaaaagtt
gaagcttttgctttaagggctagtgacctcaagactatactcactcaaaactggtggcag
cttagcaagatgctcagccacatcactggatcaaacttggagaggtggaaacctttggca
gcttcatctatactagcagcctggcgacgcagcccccgctatcgtgcctggcaacgaagc
caccgccatcatgaagatgtgcttataaagtctgcccagtggcttacaggacgggaactc
accaagtttgtgtaa
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