KEGG   Castanea sativa (European chestnut): 142618761
Entry
142618761         CDS       T11266                                 
Name
(RefSeq) GTP-binding protein YPTM2-like
  KO
K07874  Ras-related protein Rab-1A
Organism
csaa  Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csaa04131]
    142618761
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csaa04147]
    142618761
   04031 GTP-binding proteins [BR:csaa04031]
    142618761
Membrane trafficking [BR:csaa04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    142618761
 Autophagy
  Other autophagy associated proteins
    142618761
Exosome [BR:csaa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   142618761
  Exosomal proteins of other body fluids (saliva and urine)
   142618761
  Exosomal proteins of colorectal cancer cells
   142618761
GTP-binding proteins [BR:csaa04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    142618761
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase GTP_EFTU SRPRB MMR_HSR1 Gtr1_RagA LANC_like AAA_29 Septin ABC_tran AAA_16 AAA_5 AAA_22
Other DBs
NCBI-GeneID: 142618761
NCBI-ProteinID: XP_075647891
LinkDB
Position
12:24348232..24353354
AA seq 202 aa
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
IWDTAGQERFRTMTSSYYRGAHGIIIVYDVTDQESFNNVKQWLSEIDRYASENVNKLLVG
NKSDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAADIKTRMASQPMNN
VRPPTVQIRGQPVNQKSGCCSS
NT seq 609 nt   +upstreamnt  +downstreamnt
atgaatcctgaatatgactatttgttcaagcttttgctgattggagattctggtgttggc
aaatcatgtcttcttctgagatttgctgatgattcatatctggacagttacattagcaca
attggagttgactttaaaatacgcactgtggagcaagatggaaagaccataaaacttcag
atctgggatactgcaggacaagagcgtttcaggacaatgactagtagctattaccgtgga
gcacatggcattattatagtttatgatgtgacagaccaagagagctttaacaatgttaag
caatggttgagtgaaattgaccgatatgctagtgagaatgtaaacaagcttctggttgga
aacaagtctgacctcactgctaacaaagttgtgtcttatgaaacggcgaaggcgtttgcc
gatgaaattggcattccatttatggagacgagtgccaaaaatgctactaatgtggagcag
gcttttatggccatggctgctgacatcaagactcgtatggcaagtcaaccaatgaacaat
gtaaggccaccaacagtgcagatacgaggacaaccggttaatcagaaatctggctgctgc
tcttcttag

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