Castanea sativa (European chestnut): 142619057
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Entry
142619057 CDS
T11266
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
142619057
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csaa04040
]
142619057
Ion channels [BR:
csaa04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
142619057
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
S1FA
UPF0542
Tho2
DUF4199
Motif
Other DBs
NCBI-GeneID:
142619057
NCBI-ProteinID:
XP_075648248
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Position
12:complement(8420807..8438278)
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AA seq
627 aa
AA seq
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MSFHVNRLQNGESFSNMGQFLHYGFEIEGQHSSTERNPDPHRRFSQTWSIIFRLSCVIAV
SLDPLFFYVPVINEENKCIELDKKLRTLAPILRTFTDIICIINIALQFYNGYIDETSGKA
TLITDPRKIARRYLWPYLVIDILVLLPIPQVAILILFREVRGSKALGIRKFLTAVLLFQY
VPRIIQIYLSWKDPMRKANRYAKFPIWFKAAFNFSLYIIASHVLGALWYLLSIERETACW
HIACQKQPGCVGSSFNCDDHSLVNHTFLTDSCPINTPNTTDKPFDFGIFHDALKSGVVHS
KDFPQKFFQCFWWGLRNLSTLGQGLQTSNYVWESCFTILICIFGLLLFSYFIGNLQLYMQ
LETARSEKKRKKMKQEREKKEEEERMKMEEKLEMEEKKQTIGIWMFKYRLPREMKKQIMQ
NIIPKLERKKDVCVENLFCYLPEDTSNAVKRYLCLDLLKKVPVLQNMDEQLLQNICDSLK
PVYYKERSYIVREGDPIDATFFITDGIAWAYTSSNGEASSSSSHAERLEKGHFFGEELLE
LGLSKLSRLPLSPRTVKSHGPIEAFALMDEDLKKIINKNWMHIGKEQMEPFAAYVVQAAW
RRHRENKNLERSSHGGRYLPSSGTQGN
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgagcttccatgtgaatcggctacagaatggtgaaagctttagtaatatggggcaattc
ttgcattatggatttgaaattgaagggcaacattccagcacagagagaaatcctgacccg
catcgccggttctctcaaacttggagtataatatttagactgtcgtgtgtgattgcagtg
tcattagatcctctgttcttttatgttcctgtgatcaacgaagaaaataagtgcattgag
ttggacaagaagttgaggaccttagctcctatattacgaactttcaccgacatcatttgc
attataaatattgcattgcaattttataatggttatatagatgaaacttcaggaaaagct
acattaattacagatcctcggaaaatagcaaggaggtatttgtggccgtacttggtaata
gacattctcgttcttcttcctatcccacaggtggcaattttaattctttttcgagaagtg
agaggttcaaaagctttgggtataagaaagtttctgactgctgttcttctcttccaatat
gtgccaagaattattcaaatatacctatcctggaaagatcctatgaggaaagccaacaga
tatgctaaattccccatatggtttaaagctgcattcaatttctcgctctacattattgcc
agtcatgtcttgggagctctttggtatttgctttctattgagagagagacggcttgttgg
cacatagcctgtcaaaaacaacctggatgtgttggtagttcttttaactgtgatgatcac
agtttagtaaatcacacatttctaacagattcttgccctataaatacaccaaatacaacg
gataagccctttgattttggaatatttcatgacgcccttaaatctggtgttgtgcactcc
aaagatttcccacaaaaattctttcagtgtttctggtggggcctgcgaaacctaagtact
cttggtcaaggtctccaaacaagtaactatgtctgggaaagctgctttacaattcttatt
tgtatctttggattgctattattttcatatttcattggaaatttgcagttatacatgcag
ttggaaactgcgagatcggagaagaaaagaaagaagatgaagcaggaaagagagaagaag
gaagaggaagaaagaatgaagatggaggagaagttggagatggaggagaaaaaacaaaca
ataggaatatggatgttcaaatacaggcttcctagagaaatgaaaaaacagattatgcag
aacataatacccaaattggaaagaaaaaaagatgtttgtgtggagaacctgttttgttat
cttcctgaagatacaagcaatgcagtaaaacgctacctctgcttggatctactgaaaaaa
gtgccagtgcttcaaaacatggatgaacaattattgcaaaatatatgcgattctctcaag
ccagtctactacaaagagcgcagctacattgttcgagagggagatccaattgatgcaacg
tttttcattacagatggcattgcatgggcctatacatccagtaatggtgaagcaagtagc
tcctcctcacacgctgagcgtcttgaaaaaggtcacttctttggagaagaacttcttgaa
ctgggtttgtctaaactatccagactccccctatctccaagaacagtcaaaagtcatgga
ccaattgaagcctttgctctaatggatgaggacttgaagaaaataataaacaagaactgg
atgcatataggtaaagagcaaatggaaccctttgcagcttatgtggtacaagcagcctgg
cgccggcatcgtgaaaataagaatcttgaaaggtcctcccatggcggcagatacttgccg
agttcaggtacacaaggcaattga
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