KEGG   Castanea sativa (European chestnut): 142619182
Entry
142619182         CDS       T11266                                 
Name
(RefSeq) WD repeat-containing protein RUP2-like
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa04120  Ubiquitin mediated proteolysis
csaa04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    142619182
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    142619182
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csaa04121]
    142619182
Enzymes [BR:csaa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     142619182
Ubiquitin system [BR:csaa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    142619182
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     142619182
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_DCAF12 EIF3I Beta-prop_DCAF4 WD40_like Beta-prop_TEP1_C Beta-prop_SCAP Pox_Ag35
Other DBs
NCBI-GeneID: 142619182
NCBI-ProteinID: XP_075648370
LinkDB
Position
12:complement(13092838..13094450)
AA seq 394 aa
MKSFSTKSLPDQTLQTKRKQKLNIAEDEEEEEGEDNEEKARCEWDFNLSTIVSSSTSIGA
VSDTLGAIEFDPSDTLVATGGIARKIRVYSLSTLLPDEEKHVDSVSSTTLMLDHATACDY
YVCTPAKLSSLRWKPGSGNRVLGSGDYDGVVMEYDLERKIPVFERDEHGGRRVWSVDYSH
WDPVIGASGSDDGTMQIWDPRCEGGKCVATVQPSVSRSPVCCVEFNPFGGPLIVVGCADR
RAYGYDVRNLGDPVVVFDGHGKTVSYVRFLDDHMIVSAGTDGCLKLWNVDDSTRVIRTYK
GHVNSRSFVGLSVWRNGGLLGCGSENNRVFVYDKRWGEPIWMHGFEPVAGPGSDHGFVSS
VCWGQVGEDQCRLLAGGSDGVLQVFVGKRKLISY
NT seq 1185 nt   +upstreamnt  +downstreamnt
atgaaaagcttctccacaaaatcccttccagaccaaaccctacaaacaaaacgcaaacaa
aaactcaacatagccgaagatgaagaagaagaagaaggtgaagataatgaagaaaaagct
agatgcgaatgggatttcaatctctccaccattgtttcttcgagcacgtccattggagct
gtttccgacaccctaggagcaatcgaattcgatccctcggataccttggtagccacaggt
ggcatagcgagaaagattagagtttatagtttaagcactttgttgcctgatgaagaaaaa
catgttgacagtgttagtagtactacgttaatgttagaccacgctactgcatgtgactat
tacgtgtgcaccccagcaaagctgagcagcctgagatggaaacccgggtcgggtaatcgg
gtcctggggtccggggactatgatggggttgtgatggagtatgacctcgagaggaaaata
cccgtttttgagcgtgacgagcatggtgggcgccgggtctggagtgtggactattcgcat
tgggatccggttattggagcatccgggtcggacgatggaaccatgcaaatatgggacccg
cgttgtgaaggtgggaaatgtgtggctacggtgcagcctagcgtgtcacgtagccctgtt
tgttgtgtggaattcaatccatttggtgggccattaattgtcgttggatgtgctgaccgg
agggcttacgggtatgatgttagaaacttgggtgacccggttgttgtttttgatgggcat
ggtaaaactgtttcttatgttagatttcttgatgatcatatgattgtttcagctgggact
gatgggtgtttgaagctgtggaatgttgatgattctacacgtgtgattcgcacgtacaaa
gggcacgtgaatagccggagcttcgtcgggttatccgtgtggagaaatggtgggttactc
ggatgcgggtcggaaaataaccgggtctttgtgtatgataagaggtggggtgaacccata
tggatgcatgggtttgagccagtggctggacccgggagtgaccacgggtttgttagtagt
gtgtgttggggccaagttggggaggaccaatgtagacttttggcaggaggatcagatggg
gttttgcaggtttttgtgggcaaaaggaagttgatttcatattag

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