KEGG   Castanea sativa (European chestnut): 142619274
Entry
142619274         CDS       T11266                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa03020  RNA polymerase
csaa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    142619274
  09124 Replication and repair
   03420 Nucleotide excision repair
    142619274
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csaa03021]
    142619274
   03400 DNA repair and recombination proteins [BR:csaa03400]
    142619274
Transcription machinery [BR:csaa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     142619274
  RNA polymerase III system
   RNA polymerase III
     142619274
  RNA polymerase I system
   RNA polymerase I
     142619274
DNA repair and recombination proteins [BR:csaa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      142619274
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 142619274
NCBI-ProteinID: XP_075648448
LinkDB
Position
12:13647649..13652268
AA seq 143 aa
MADEDYNDLDMGYEDEPPEPEIEEGAEEDPENNANEDVPGDLVEGEDKEEPEPVERPRKT
SKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQRKVPFTIRRYLPDG
SYEDWGVDELIVEDSWKRQVGGD
NT seq 432 nt   +upstreamnt  +downstreamnt
atggccgatgaagattacaatgatttggacatgggatatgaggatgagccgccagagccc
gagatcgaggaaggtgcagaggaggatccagagaataatgccaatgaagacgttcctgga
gaccttgttgaaggtgaggataaagaagagccggaaccagttgaacgtcctcgtaagacc
tctaaatatatgacaaaatatgagcgcgctagaatattgggtacccgtgctctgcagatc
agtatgaacgcacctgtgatggtcgagttggagggtgaaactgatccacttgagatagca
atgaaggagcttcgtcagcggaaagtaccattcaccatccgccgctacctgccagatgga
agttatgaagactggggagttgatgaattgattgtggaagactcatggaagaggcaagtg
gggggcgattga

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