Castanea sativa (European chestnut): 142619648
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Entry
142619648 CDS
T11266
Name
(RefSeq) uncharacterized protein LOC142619648 isoform X1
KO
K13210
far upstream element-binding protein
Organism
csaa
Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csaa03019
]
142619648
03041 Spliceosome [BR:
csaa03041
]
142619648
Messenger RNA biogenesis [BR:
csaa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
142619648
Spliceosome [BR:
csaa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
142619648
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH-I_KHDC4-BBP
KH_2
KH_KHD4_2nd
Motif
Other DBs
NCBI-GeneID:
142619648
NCBI-ProteinID:
XP_075648963
LinkDB
All DBs
Position
12:complement(508851..515677)
Genome browser
AA seq
775 aa
AA seq
DB search
MAEEGFVVVGGSEAEEAVVADPNPNSQPDHHKRKLEDLELGAPEHGHIADLNADPEDVPA
DGGGDGDGDDDEDDDGADVAEPVKRQRLDEKSDGSANENGYQQKEENGDEPVGENNEEPN
VEGLQSEDAQPLAEEVRQTVADGEEAPSVENPEMGDAQQPSVEDSVTENAQDPSKVQNQE
PFTEGADTTSRKMEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPQSATRPVE
IIGTLDSITKAEKLINAVIAEADAGGSPSLIARGLTTAQAAAASEQVQIQVPNEKVGLII
GRGGETIKGLQTRTGARIQVLIPQHLPEGDESKERTVRVTGDKKQIEMARELIKEVMSQP
VRPSSFSGGFNQQAYRPRGSTGPPQWGPRGPHPAAYDYQHRGPYPSHNPQYPSPGYGGYH
QQAPPRGNYSGGWEQRPSMQGPPSHTGGYDYYGGQGGHMSDAPASAQHSAPIPSHGHGPS
HAAAMGPPSSQANYNYGQPQGPDYGHTAPYSQAAPHQQSYGHGYDEPKYESHAPTQHPYG
GHGSSQPVYSQTQPGYAAQQYGKPQPYGQGPHPQSYAPPRATQPGEMPYQGTAPAQSYGP
NATPQQPYPYQSSGQMQQSYPPYGSAPAADAYNQPPPASGPVYPQQGGQPGYGQPGAQQA
QGYAQVGPTGGYGPYAASQQGYPEQAAPNNAAYGYQGPQDPAYSGAPASAYSAPPSGQPG
YAQPAPTQQGYDQSVPQSGGYGSAPATAPVAYGKTVSPQPGYAQYDSTQMYGAPR
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaagggtttgttgttgttggtggttcggaggcggaggaggcggtggtggcc
gacccgaacccgaattcgcagccggatcaccacaagcggaagcttgaggatctggagctc
ggagctccggagcacggccacatcgccgatttgaatgccgaccccgaagacgttccggcc
gacggaggcggcgacggcgacggcgatgatgacgaggacgacgacggcgctgacgtggcg
gagcccgtgaagcggcagcggcttgatgagaaatctgacggctcagctaatgaaaatggg
taccaacaaaaggaagagaatggggatgagcctgttggtgagaacaatgaggaacctaat
gtggagggtttgcagtcagaggatgcccaacctcttgctgaggaagttcggcaaacagtg
gccgatggtgaggaagcaccctctgtggaaaatcccgagatgggtgatgcccaacaacca
tctgttgaggattctgtgacggaaaatgctcaagacccatctaaagtgcagaatcaggaa
ccatttactgagggtgctgatactacgtcacgcaaaatggaggtgcctaataataaggtt
ggagttcttattggaaaggccggggatactattcgttacttgcagtacaattcaggggca
aaaattcaaatcacaagggatgctgatgctgatccacaatctgcaacaaggcctgtggaa
ataataggaactttggatagtataactaaggctgagaagcttataaatgctgtcattgca
gaggctgatgcagggggttctccttcccttatagccaggggcctcactactgcacaggct
gctgcagcatctgaacaagtacagatacaagttccaaacgagaaggttggcttaataata
ggcaggggtggagagactattaaaggtctgcagaccagaactggagcacgcatccaggta
ttgatacctcaacatcttccagaaggagacgaatctaaagaaagaaccgtacgagtgact
ggtgacaagaagcaaattgaaatggctagagagttgataaaggaagttatgagtcagcct
gtgaggccatcatctttctcgggtggtttcaatcagcaggcctatcggcctcgtggatct
actggaccaccgcaatggggtccacgtggtcctcatcctgcagcatatgattaccagcat
cgaggaccatatccaagtcataacccacagtatccatctccaggatatgggggttatcat
caacaagcccctccaaggggcaactacagtggtggttgggaacaaaggcctagcatgcag
ggtccaccctcacatactggtggttatgattactatggcggacaaggaggccacatgtct
gatgccccagcatctgcccaacattctgctccaattccttcacatggtcatggcccttcc
catgctgctgctatgggtccaccatcatcccaggcaaattacaattatggacaaccacag
gggccagattatggacatacagctccttattctcaggcagcacctcaccagcagagctat
ggccatggatatgatgaaccaaaatatgaaagtcatgctccaacacagcatccctatgga
ggacatggaagttctcagccagtgtactcacagactcaaccgggttatgctgcacagcag
tatggtaagccacagccatacggacagggaccacatccccaatcctatgcccctcctaga
gctactcaacctggggaaatgccttaccaaggtactgctcctgctcaatcatatggcccg
aatgcaacccctcaacaaccttacccatatcaatccagtgggcagatgcagcaatcatat
cctccatatggttctgcacctgctgctgatgcttataatcagccaccacctgcatctggt
cctgtttatccacagcaaggagggcagccaggttatggtcagcctggtgcacagcaggca
caagggtatgcgcaagtgggtcctactgggggttatggcccatacgcagcttcacaacaa
ggttacccagagcaggcagctcctaacaatgcagcttatggttaccaaggaccacaagat
cctgcttacagtggtgcccctgcttcagcctatagtgcaccaccaagcggtcagccaggt
tatgctcaaccagctccaactcaacaaggttatgaccagtctgtcccacaatcaggaggt
tatggaagtgcaccagcaactgctccggttgcttatggcaaaactgtgtcacctcagcct
ggttatgctcagtatgactcaactcaaatgtatggcgcacctcgttga
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