Castanea sativa (European chestnut): 142619657 Help Entry 142619657         CDS       T11266                                  Name (RefSeq) 5'-3' exoribonuclease 2-like   KO K12619   5'-3' exoribonuclease 2 [EC:3.1.13.-] Organism csaa  Castanea sativa (European chestnut) Pathway csaa03008   Ribosome biogenesis in eukaryotes csaa03018   RNA degradation Brite KEGG Orthology (KO) [BR:csaa00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     142619657   09123 Folding, sorting and degradation    03018 RNA degradation     142619657  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:csaa03021]     142619657    03019 Messenger RNA biogenesis [BR:csaa03019]     142619657    03009 Ribosome biogenesis [BR:csaa03009]     142619657    03016 Transfer RNA biogenesis [BR:csaa03016]     142619657 Transcription machinery [BR:csaa03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      142619657 Messenger RNA biogenesis [BR:csaa03019]  Eukaryotic type   mRNA degradation factors    5'-3' decay     5' exonucleases      142619657 Ribosome biogenesis [BR:csaa03009]  Eukaryotic type   Pre-60S particles    RNases     142619657 Transfer RNA biogenesis [BR:csaa03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     142619657 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  XRN_M XRN_N Motif Other DBs NCBI-GeneID:  142619657 NCBI-ProteinID:  XP_075648978 LinkDB All DBs Position 12:complement(23197410..23224880) Genome browser AA seq 1505 aa AA seqDB search MGIPSFYRWLLDRYPRTVVDAIEEEPPDATKRNPNGKEFDNLYLDMNGIVHPCFHPEGLP PPKTYDDIFAAIFTYIDRVFSIVRPRKLLFLAIDGVAPRAKMNQQRSRRFRAAKDAAAEA ASREKIFESEEEKAAYLEQCKKMDSNVITPGTEFMALLSSALSYYIHLRMNKDPGWRGVK VILSDANVPGEGEHKIMSYIRLQRNLPGYDVNTRHCLYGLDADLIMLALATHELHFFILR EDVRGARSNDKHQQDNMNKSKTMEVEGENLEGFISRQKFQFLNILILREYLQLDMTIKAK KKSSKKKSIFTKKKKKKKLKLERLIDDFVFMCLFVGNDFLPHIPSLEISEGAIDLLMMVY KKEFRKMGGYLTDSFKVNLKRVEHFVQVLASHECAIFRRRCQMQKERGLRHRRFSNKKNT RSSSNLISQNHQNSNSVETQTPINLSSVGKNAVVDEIKLGETKGWKERFYAEKFEAETKD ACEKIRRHAVSKYIEGICWVMHYYYEGVCSWQWFYPYHYAPFASDFSGVDQLKIEFTLGK PFKPFDQLLSVLPAASAHALPLFYRKLMTDTSSPLSDFYPTDFELDMNGKHFSWQAVCKL PFIDESRLLSEISKVEHTLTEEERCRNSFSLDVLFVHASHPLTVKILAFCQRKAVHPKFA GTKVKRKINPKFSDGMNGYMYISDKPVRPVEIFSPIEDMEIISNNEVLSVFFKCPPFHSH ITSLSTGVKVPRMSIRKKDILPPPVLWHKKSAVLGRIHSERSIPKSISGHLLAKLARKLL SKCYPQRKKWGSMELGDNIGVDGFTSHLNLIDTVPQGGAGFYENCIYCDNGAPDEQVGKT RANVLECGRVPITNHVNRKTLIPSLKPKRSKAIRAMDLEPSIFELAAEAEKNWVNHEVPD AHVGETGTNRVVCAQNLEPTIFELGAATDKNCVDGVPDNEVGANEANGLVCASGVPDNRV DVKSKKKKRKQSKAGGAQNLGPTSCEVGTGAEKNCINHEVPDTHVGETDTNRVVCAQNLE PAIFELAAVADKNCVDGVPDNHVGANEANGLVCASGVLDNCVDVKSKKKKLKRSKAGGAQ NLGPTSCEVEMGAEKNCVNHEVPDTHVGETGTNRVVCAQNLEPTIFEFVAAADKICVDGV PDNQVGVNEANGLICASGVPDNCVDVKSKKKKRKRSKAGRAQNLGPTSCEVGTGAENNCI NHEVPDTHVGETCTNKVVCAPNLELTIFELVAAADKNCVDGVPDSQVGVNEANGLVCASG VLDNCADIKRSKAGGAQNLGPTSCEAGMGAEKNCVNHEVPDTRVGETGTNRVVWAQNLGP TNFEVGTAADKNCVDNRDPDKHVGETGETGANGLVHASGVPDKNCVNVKSKKRKRKGSKV SGAQNLELTICEAGTGANLNCFDRVQDKHVGDSVSNGLICASGVLDKNCVDGKSKKKRQK RCTVGGAENLEPAICELETGVDEVFVDNGLQDHHVGETGAKALEYSKEVQINNVGENGAK ALAFG NT seq 4518 nt NT seq  +upstreamnt  +downstreamnt atgggaataccttcattttacagatggcttttggacaggtacccccggacggtggtggac gccatcgaagaagaaccgccggacgccaccaagcggaacccaaacggcaaggaattcgac aacctctacctcgacatgaacggcatcgtccatccctgcttccaccccgaaggcctgccg cctccaaaaacctatgacgacattttcgccgccatcttcacctacatcgaccgcgtcttc tccatcgtcaggccccgcaaactcctcttcctagcaatcgatggtgtagcgccgcgagct aagatgaatcaacaacgttcaaggcgttttcgggcagctaaggatgcagccgctgaagct gcttcaagagagaagatatttgaatcagaagaagaaaaggcagcgtatttggagcagtgt aagaagatggactcaaatgtgatcacacccggaaccgaattcatggcattgttgtcatcg gctcttagttattatatacatttgcggatgaataaagatcccgggtggcggggagttaag gtcattctttctgatgcaaatgttcccggtgaaggggagcataagataatgtcttacatt cgcttacaaagaaatcttccgggatatgatgtaaacaccaggcattgtctgtatggattg gatgcggatcttatcatgcttgcactagctacccacgaattacatttctttattctgaga gaggatgtccgtggagcaagatcaaatgataaacatcagcaagacaatatgaacaagtca aagacaatggaagtggagggcgaaaatctagaaggatttatctcaaggcagaaatttcag tttctcaacatattgattctcagggagtatttacaacttgacatgaccatcaaggcaaaa aagaagtcctcaaaaaagaagtccatatttaccaaaaaaaagaagaagaagaagttgaaa ttagaacgcctgattgatgattttgtcttcatgtgcttgtttgttggaaatgactttctt ccccacattccttcattggaaatatctgagggggctatcgatctgctcatgatggtttac aaaaaggaatttcgcaaaatgggaggttacctcacggattcttttaaggtaaacttgaaa cgcgtggagcactttgtccaggttttggcatctcatgaatgtgcaatttttagaagacga tgccagatgcagaaggaaagaggactccgccatcgacgattttcaaataagaagaatacc cgttcttcaagtaaccttataagtcaaaatcaccaaaactcaaattctgttgagactcaa acaccaatcaacttgtcatccgttggcaaaaatgcagttgtggatgagattaagctggga gaaacaaagggttggaaggaaagattttatgctgaaaagtttgaggctgaaactaaagat gcctgtgagaaaattcggagacatgcggtttctaaatatattgaagggatatgttgggtc atgcattactactacgaaggagtatgctcgtggcaatggttttacccatatcattatgcc ccgtttgcttcagactttagtggtgttgatcaattaaaaattgaattcacattagggaaa cctttcaagccatttgatcagttgttgagtgtattgcctgctgcaagtgcacatgctctt cctttgttttacaggaagctgatgacagatacgtcatcacctttatcagatttttaccct actgattttgagcttgatatgaatgggaaacacttttcctggcaggctgtttgtaagtta ccatttattgatgagtcacgccttctttcggagatttcaaaagtggagcatacattgacg gaagaagaaagatgcagaaatagtttcagtctggatgttctgtttgttcatgcttcacat cctttaacggtgaagatacttgctttctgtcagagaaaagctgttcatccaaagtttgct ggcactaaagttaagcgaaaaattaatccaaagttcagtgatggaatgaatgggtacatg tacatttccgataagcctgtgcggcctgtggaaatcttttcaccaattgaggacatggag attatttctaataatgaagtattatcagtcttcttcaaatgcccaccgttccattctcac atcactagtctgtcaacaggagtaaaagtgcctcgcatgtctatcaggaagaaggacatt ttacctccacctgttttgtggcataagaagtcagctgtccttggacgcatacattctgaa aggtccatccctaagtcaatctcaggtcatcttctagcaaaattagctcgtaaacttcta tctaaatgttaccctcagagaaagaagtgggggtctatggaactgggtgacaacataggt gtggatggattcacatcccatttgaatttgattgatactgttccacagggtggggctgga ttttatgaaaactgcatttattgtgataatggagctccagatgaacaagttggcaagact agagcaaatgttttggagtgtgggagagtaccaattacaaatcatgttaatcgcaaaaca ctgattccaagtttgaaaccgaaacggagcaaagccatacgtgcaatggatttggagcca tcaatttttgagttagcagctgaagctgaaaaaaattgggttaatcatgaagtcccagat gcacatgttggtgagacaggcacaaatagagtggtatgtgcacagaatttggagccaaca atttttgagttaggggctgcaactgataaaaattgtgttgatggagtcccagataatgaa gttggtgcgaatgaggcaaatggattggtatgtgctagtggagttccagataatcgtgtt gatgtcaaatctaaaaaaaagaaacggaaacagagcaaagccggaggtgcacagaatttg gggccaacaagttgtgaggtagggacgggagctgaaaaaaattgtattaatcatgaagtc ccagatacacatgttggtgagacagacacaaatagagtggtatgtgcacagaatttggag ccagcaatttttgagttagcggctgtagctgataaaaattgtgttgatggagtcccagat aatcatgttggtgcgaatgaggcaaatggattggtatgtgctagtggagttctagataat tgtgttgacgtcaaatctaagaaaaagaaacttaaacggagcaaagccggaggtgcacag aatttggggccaacaagttgcgaggtagagatgggagctgaaaaaaattgtgttaatcat gaagtcccagatacacatgtcggtgagacaggcacaaatagagtggtatgtgcacagaat ttggagccaacaatttttgagttcgtggctgcagctgataaaatttgtgttgatggagtc ccagataatcaagttggtgtgaatgaggcaaatggattgatatgtgctagtggagttcca gataattgtgttgatgtcaaatctaagaaaaagaaacggaaacggagcaaagctggacgt gcacagaatttggggccaacaagttgtgaggtagggacgggagctgaaaataattgtatt aatcatgaagtcccagatacacatgttggtgagacatgcacaaataaagtggtatgtgca ccgaatttggagctaacaatttttgagttagtggctgcagctgataaaaattgtgttgat ggagtcccagatagtcaagttggtgtgaatgaggcaaatggattggtatgtgctagtgga gttctagataattgtgctgatatcaaacggagcaaagctgggggtgcacagaatttgggg ccaacaagttgcgaggcagggatgggagctgaaaaaaattgtgttaatcatgaagtccca gatacacgtgttggtgagacaggcacaaatagagtggtatgggcacagaatttggggcca acaaattttgaggtagggactgcagctgataaaaattgtgttgataacagagacccagat aagcatgttggtgagactggtgagactggggcaaatggattggtacatgctagtggagtt ccagataaaaattgtgttaatgttaaatctaagaaaagaaaacggaaagggagcaaagtg agcggtgcacagaatttggagctaacaatttgtgaggcaggtactggagccaatttaaat tgttttgatagagttcaagataagcatgttggtgatagcgtatcaaatggattgatatgt gctagtggtgttttggataaaaattgtgttgatggaaaatctaagaaaaagagacagaaa cggtgcacagtggggggtgcagagaatttggagccagcaatttgcgagttagaaactgga gtcgatgaagtgtttgttgataatggtctccaagatcaccatgttggtgagactggagca aaagcattggaatattctaaggaagtccaaattaacaatgttggtgagaatggagcaaaa gcattggcctttggttaa

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