Castanea sativa (European chestnut): 142619663
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Entry
142619663 CDS
T11266
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csaa03041
]
142619663
Spliceosome [BR:
csaa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
142619663
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
DUF4523
RRM_10
DUF8400
Motif
Other DBs
NCBI-GeneID:
142619663
NCBI-ProteinID:
XP_075648984
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All DBs
Position
12:complement(9045282..9053139)
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AA seq
448 aa
AA seq
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MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
EFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEGA
DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPSYL
LPEHLGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDGSGQVIMGLDGKKLE
PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK
EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTTPMVTSQPSILGQQPTS
VMGSTVQYSGAPFTPSQEQPGLPQQPSAGWGPGVPPMPQSMPMQMHNNPYMPPGTMPPQA
APGMMQSPMQSGMPQSSMLPRYGSGQMQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggtatccagtcagccacaatttcgttacacccaacctccatcaaaggtgctc
catttgcgaaacttgccatgggagtgcacagaggaggaactgattgaacttgggaagcca
tttggtaaagttgtgaacacgaagtgcaatgttggagcaaaccgaaatcaggcttttatt
gaatttgctgatttaaatcaagctattgctatgatatcatattatgcctcatcctcagag
cctgctcaagtgcgtggaaaaactgtctacctacagtattcaaataggcaagaaatagtg
aacaacaaaactactgcagatgttgctggaaatgtacttttggtaacaatagagggtgca
gatgcacgccttgttagcattgatgttttacacctggttttttctgcttttggatttgtg
cataagattactacctttgagaagacagctggattccaggcgctggtacaattttcagat
acagagactgcctcttctgcaaagaatgccctagatggaagaagcattcctagttatctt
cttcctgagcatttgggaccatgtacccttaggatcacgtattctgcacacacagatttg
agtgtgaaattccagagccaccgtagcagggactacactaatccttaccttcctgttgct
ccgtcagccatagatggaagtggtcaggtaattatgggtttggatgggaagaagctagaa
ccagagagtaacgttcttcttgcatctattgagaacatgcaatacgctgtcaccttggac
gttttacacatggtgttttctgcttttgggcctgtacaaaagatcgccatgtttgataag
aatgggggtgtacaggctttgattcagtaccctgatgttcaaactgctgttgttgctaag
gaagccttggaaggacattgcatctatgatggagggttttgcaagcttcacatctcatat
tcacgccatactgatctcagcattaaggtcaacaatgatcggagcagagactatacaatc
cctaacaccacccccatggtgacctcccagccctcgattctggggcaacagccgacttca
gtgatgggctccactgttcaatacagtggggctccttttactccaagtcaggagcagcct
gggttgcctcaacaaccttcagctgggtggggcccaggtgttccaccaatgcctcagtcc
atgccaatgcaaatgcataataatccttacatgccacctgggacaatgccacctcaagct
gccccaggaatgatgcagtctcctatgcagagtggcatgcctcaatcatcaatgttgccc
cgttatggatctgggcagatgcaatag
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