Castanea sativa (European chestnut): 142619721 Help Entry 142619721         CDS       T11266                                  Name (RefSeq) protein SHORTAGE IN CHIASMATA 1   KO K28108   shortage in chiasmata 1 Organism csaa  Castanea sativa (European chestnut) Brite KEGG Orthology (KO) [BR:csaa00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:csaa03036]     142619721 Chromosome and associated proteins [BR:csaa03036]  Eukaryotic type   Meiosis-specific proteins    Others     142619721 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Ubiq-assoc Motif Other DBs NCBI-GeneID:  142619721 NCBI-ProteinID:  XP_075649081 LinkDB All DBs Position 12:12909280..12920054 Genome browser AA seq 1653 aa AA seqDB search MRTRFLNIDYFSPIQALEPQSFLHLPVPHLPPPPLPPPSLSSFDDLFTSFASPLHVSSAL HDLPLDSALSDFFSAVLPHRIDHAGTEDSDAAAPTPCFRETRLSQQEAEVLYEEKEGESQ GTCGTETLEIALPNKDNGDASRYEVIQFETPEPNVFLEDACFFEKYEIQNLSEDPDNENN QEMLRQALTMQCPYEVQELIYSVENVASEYYMEQNIYVLEDDGSVQDQMCFGRSIFPSLE VDETSLGTLTCLSIMEELLLHLENTERQCWLHKDDLVNDSEELLGSRGCDISQFLSDHFL SQQCLESELASVDMFPEMDFISMVETLQIEGNSSVRVSPVIFEEFQFLDMDSSQFFVVFF KTQTTDEPETCDCMFRGDINFKNFNELIVSHELALVDSIFKSLPVPLFSDHEKIRSPSSI AEEILADLKPQPLSASDGIYLDWHLLDEDKCNSRIYSSYQSMLEEVDSHSFDFDLEDFDN GKLVFDFVLSDNALNGPNTEEKKESRKFLSDDISVPNGDIVGGTSNKLLDDQYPEPGNGE HLAEKSAERALLFKSTSQFNDLDFFLNPRKANSGDVDSTINTVDTNAMIPDVPSNHSKAA CLSTGVQLQSWEIVLYRVKLSDAIMVIMDNFEKSYLAVLQNERELIKTDLPFLTADNHKL LSLPKQKLMDCIKKINAQRTTSHGDENIMELVTLCAIKQMAWFMCFYGILPVHLYVDKLC QSLECLKSRLGILQSLIEDAHKKIDRAICSLHPSLTVIQEILRSNTTKSNLKVLIVAEKI FWWSLKSLLMSLGLSFSEFQNYYPHARQPDLCKTDFKFTRTDTLPVPECLLASHEHISAS FPFNKFNIILEYGGSYGISRISSFSPNLVGLPPIHFLKVELDKSSACEALCEGVDMPCYS ETTMQEDGNIKKLEKLLNFLPIEDMFAMGSSGAADEAEACCMPLPLPTMPFATKSENISQ SMVSSPETVITVNTQNFDKQMIVSRRSTYQKILAMEKEGAQVVERDSDLPVDVIMSSAIC LAWYDCRNIGKKATALDEASSSMPMCVENIATNVLTLLSFAFSGCILVFEGDVDFLSTVM ESSDGFYAAAASLGIDLQIFCSYSSELTDDIILSCISYAIKLTRGLYPKMPESETLAESF LTKFPSINPLTAHAILSSGGILVEFLEGSHERRIHAIKKYLVSDESVTLFSALCKYGERD DSKSIMTDCSSSVSSGPDSERCRFNVDSGRKRRKYSDSPHKIDIDMDDLLCFEPLNQITD DNLDPSTVSKPYNQWMSKDYEIFDEFRTPSLTSNGLFGQKQGLDMGMMIKPSSVTKPYDS QFSKSPPISNEIKKPYFSLSDKRFGQNQGSDLAMMNNLDWLSVKKPENLQDLIGEVIDLT DSPVSGKDLSSFDNSPKFSFWVPEMDSDSSRKFKIARRLSFDEGGHPTCSMAVEMNSNSD IWTFKKDQRQTVPGVNDYPDTNFNDIFPVKHRGMPDKGLTQRSAENSKELSFQEKEMSSY GGTPLSNALRSAHPQQNSPWTIEFLNRIREKSRMHHQSLPCDAVAPCFEYPGNVSKVSKR RSPSILEFFKYQGGSTPKKAPEQKRQKRSIKPSSSSKNEKISSSVLPTSTPADKRARQTL SFAMNGSGGQTKLVWSDGPDGARNLNKRFQNQI NT seq 4962 nt NT seq  +upstreamnt  +downstreamnt atgcgaactcggttcctgaacatcgactacttctctccgatccaagccctagaaccccaa tccttcctccacctcccagtccctcacctccctcctcctcctcttcctcctccttctctc tcctccttcgacgacctcttcacctccttcgcttcgcctctccacgtttcctccgctctc cacgacctccctctcgattccgcgctctccgatttcttctccgccgttctccctcaccgc atcgaccacgccggtaccgaagactccgatgctgccgctccaacgccttgcttccgcgag actcggctatcgcagcaagaagctgaggttctgtatgaagagaaggaaggggagagtcaa ggaacttgtggaactgaaactctagagattgcactgccaaataaggataatggggatgca agcagatatgaagtaatccaatttgaaacaccagaaccgaacgtgttcttggaagatgcc tgcttttttgagaaatatgaaatacaaaatctgtctgaagatccagacaatgaaaataat caggaaatgcttaggcaagcacttacaatgcaatgtccttatgaggttcaagaattgatt tattcagttgaaaatgttgcttcggagtactacatggagcaaaacatttatgtcttggaa gatgacggttctgttcaggatcaaatgtgctttggccgaagcatatttccttctctagaa gttgatgaaacaagtctgggaactttgacatgcttgtctataatggaagaacttctttta catcttgaaaacactgagcgccaatgttggcttcataaggatgacttggtcaatgacagt gaggaacttttgggctcaaggggatgtgatatctcacagtttctttcagatcattttcta tctcagcaatgcctggaatctgaactggcatctgtggacatgttcccagaaatggacttc ataagcatggtggaaactttacagattgaaggaaactcctctgtgagggtgagccctgtt atttttgaggaattccagttccttgatatggattcatctcaattttttgttgtcttcttt aagacacagaccactgatgaaccagaaacatgtgactgcatgtttaggggagacattaac tttaagaattttaatgaattgattgttagtcatgaattagccttggtagatagcatattc aaatcattgcctgttcctcttttctctgatcatgaaaagataaggtccccatcctccatt gctgaagaaatactagctgacttaaagccacagcccctatctgcatctgatgggatatac ttggattggcatcttttggatgaagataaatgcaactcaagaatctattcttcctatcag agtatgttggaggaggtagattcacatagctttgattttgatttggaagattttgataat ggcaagttggtatttgactttgtcttgtcagataatgctttgaatgggccaaacacagaa gaaaaaaaggaatcacgaaagtttctttctgatgacatttctgtgcctaatggtgatatt gtgggagggacttcaaacaaattgttggatgatcaatatccagaaccaggaaatggagaa catttagctgaaaaaagtgctgagagggctttgttgttcaagtctacgtcacaattcaat gatcttgattttttcttgaatcctcggaaagctaattctggggatgttgactctactatt aacactgttgacactaatgctatgattcctgatgttccatccaatcactcaaaggcagca tgtttgtccactggagtacagttgcagagttgggaaattgtgttgtatcgagttaagctt tctgatgctattatggtcatcatggacaactttgaaaagagctatctagctgtcctgcaa aatgaaagagagctgataaagacagatctcccatttctaacagcagataaccataaattg ctcagccttccaaaacaaaaattgatggactgcattaagaaaataaatgcacaaagaacc acttctcacggagatgaaaacattatggaacttgttaccttatgtgcaattaaacagatg gcttggttcatgtgtttttatggcatccttccagtgcatctttatgtagacaagttatgt caaagcttggaatgcttgaaatcaagacttggcatcctacagtccttgattgaagatgca cacaagaagattgacagagcaatatgtagcttacatccctcactgactgttattcaggag attttacgttcaaacacaaccaagagtaacttaaaagtattgattgtggctgaaaaaata ttctggtggtcgttgaagagtttgttgatgtcgctgggattatcatttagtgagttccaa aattactatccacatgcaaggcaaccagatctgtgtaaaacagacttcaagtttactaga acagataccctgcccgttccagagtgcctgttggcatcccatgagcatatttctgcatca tttcctttcaacaaattcaacataatcttggaatatggaggttcgtatggcatatctaga atatcgtctttttccccaaatctggttggattgcctcctattcacttcttgaaagtggaa ctggataaatctagcgcttgcgaagcactgtgtgaaggtgttgatatgccctgttatagt gaaacgacaatgcaagaggatgggaatatcaagaagttggagaaactgctaaacttttta cccattgaggacatgtttgcaatgggatcttcaggagctgcagatgaagcagaagcttgc tgtatgcctctgccacttcccaccatgccatttgcaacgaaatcagagaatatttcacaa agcatggtgtcttcccctgaaacagtcatcactgtgaacactcaaaattttgacaagcaa atgatagtatccagaagaagtacctaccaaaaaattcttgccatggagaaagaaggagca caagttgtggaacgagattcagatttgcctgtggatgttataatgagttctgctatatgc ttagcatggtacgattgcagaaacattggaaagaaagcaactgcattagatgaagcttct tcatccatgcctatgtgtgttgagaatattgctacaaatgttttaacattgctgagtttt gcgttcagtggctgcattctggtctttgagggagatgtcgacttcctttccactgtaatg gaatcctcagatggattctatgctgcagcagcaagcctgggaattgatttgcagatcttt tgctcctattcatctgagttgacggatgatattatattgagctgcatcagttatgcgatt aagttgactagaggcctataccctaaaatgcccgagtcagaaactcttgccgaatcattt cttaccaaatttccttccattaatcctttgacagctcatgcaatactgtcttcaggaggt attctcgttgaatttcttgaagggtcacatgaacgcaggatccatgcaatcaaaaaatac cttgtttctgatgagagcgtcaccctgtttagtgctttgtgcaaatatggtgagcgggat gattctaaatctataatgactgactgctcttcctcagtatcttctggtcctgactcagag aggtgtcgttttaatgtggattctggaagaaaaagacgaaaatacagtgacagccctcac aaaattgacatagatatggatgacttactgtgtttcgagccattaaaccaaatcactgat gacaacttggatccttctacagtatccaagccatataatcagtggatgtcgaaagattat gagatatttgatgagttcagaacaccaagtttaacttcaaatggtttatttggtcaaaaa cagggattggatatgggtatgatgataaagccctccagtgttaccaagccatatgattct cagttctctaaaagtcctcccatatcaaatgagataaaaaagccttatttctctttgagt gacaaaaggtttggtcaaaatcagggatcggatttggctatgatgaacaatttggattgg cttagtgtcaagaaacctgagaatctgcaggaccttataggtgaagttattgacctaacc gatagtcctgtatcaggtaaggacttgtcttcttttgataattccccgaagttctcattt tgggtgcctgagatggatagtgactcctcaagaaaatttaaaattgcaagaagattgtca tttgatgaaggcggtcaccctacttgctcaatggctgtggagatgaattcaaattcagat atctggacttttaagaaagatcagaggcaaactgtgccaggagtcaatgattacccagat acaaatttcaatgatatttttcctgtaaaacaccgtggaatgcccgacaaaggcttaaca cagagatctgcagaaaattcaaaggaattatcattccaagagaaggagatgtcatcttat ggtggaacaccgctctcaaatgctctccgttcagcccatccgcaacaaaactcaccttgg acgatagagtttcttaacagaatcagggaaaagagcagaatgcatcaccagtcccttcca tgtgatgcagttgctccttgttttgagtatccagggaatgtatcaaaagtttccaagaga agaagtccctctattcttgaatttttcaagtaccaagggggcagcactcctaaaaaggca ccagaacaaaagaggcagaagcgatctataaagccatcaagctcatctaaaaatgagaag atttcatcctctgttcttcccacatcaacaccagctgataagagagcaagacagactcta tcttttgcaatgaatggaagtggaggccaaactaagctggtttggagtgatggtcctgat ggagctcgcaatctgaacaaaaggtttcaaaatcaaatataa

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