Castanea sativa (European chestnut): 142619884
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Entry
142619884 CDS
T11266
Name
(RefSeq) valine--tRNA ligase, mitochondrial 1-like
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
142619884
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csaa01007
]
142619884
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csaa03016
]
142619884
Enzymes [BR:
csaa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
142619884
Amino acid related enzymes [BR:
csaa01007
]
Aminoacyl-tRNA synthetase
Class I (U)
142619884
Transfer RNA biogenesis [BR:
csaa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
142619884
Prokaryotic type
142619884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
CENP-Q
Motif
Other DBs
NCBI-GeneID:
142619884
NCBI-ProteinID:
XP_075649349
LinkDB
All DBs
Position
12:complement(14275171..14295762)
Genome browser
AA seq
1103 aa
AA seq
DB search
MLGLAARFFERPPLLLLNLATRITSAHPQPPLFAQSRFRFFSATNNNNNNNIMADSEKKP
EIEDLEKKKKKEEKAREKELKKQKALEKAAKLQAQQASNTQKKSEKKTVKRGGEEENPEE
FIDPQTPSGEKKRMSSQMAKQYSPAAVEKSWYEWWEKSGFFVADAKSSKPSFVIVLPPPN
VTGALHIGHALTAAVEDTIIRWRRMSGYNTLWVPGMDHAGIATQVVVEKKIMRERKLTRH
DIGRERFVSEVWDWKNRHGGTILQQLRRLGASLDWSRECFTMDEQRSRAVTEAFVRLYKE
GLIYRDLRLVNWDCVLRTAISDIEVDHIEIKDRTPLKVPGYEKPVEFGVLTSFAYPLEGD
LGEIVVATTRVETMLGDTAIAIHPDDPRYKHLHGKFAIHPFNGRKLPIICDAILVDPKFG
TGAVKITPAHDPNDFEVGKRHNLEFINIFTDDGKINTDGGPEFSGMPRFNAREAVTEALQ
KKGLYRGAKDNEMRLGICSRTNDVVEPLIKPQWYVNCSSMARQGLDAVVDEENKKIEIIP
KQYSADWKRWLENIRDWCVSRQLWWGHRVPAWYVTLEDDERKELGAYNDHWVVARNEDEA
QVEASRIYNGKKFHLSQDPDVLDTWFSSGLFPLTVLGWPDDTEDLKAFYPTSVLETGHDI
LFFWVARMVMLGMKLGGDVPFRKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGL
QKRLEEGNLDPKELTVAKEGQTKDFPNGISECGADALRFALISYTAQSDKINLDILRVVG
YRQWCNKLWNAVRFAMSKLGDDYVPPTNVNPDDLPFSCQWILSVLNKAISKTITALESYE
FSDAASTVYSWWQYQLCDVFIEAIKPFFSGSDPKSESERSFAQDTLWLCLDNGLRLLHPF
MPYVTEELWQRLPSSKDCTMIESIMICKYPSIVEGWTNETVEYEMDLVDSAVKSLRSLAN
ERRERRPAFVLCRNAAFAEIIDSHQREIITLANLSTLTVIGENDATPVGCAVSVVNENLS
VYLELRGTLSPEAELEKIRKKVDEIQKQHDKLSKVTSATGYKEKVPEHIQQENVAKLASL
MQEILSLEEARQHIEAQANTNHD
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgctaggtttggcggcgaggttttttgaaaggccaccgttacttttgctcaacctcgca
acccgaatcacctccgctcatccacaaccaccattattcgcacaatctcgtttccgattc
ttctcagctacgaacaacaacaacaacaacaacataatggcggattcggagaaaaagcct
gaaatcgaagacctcgagaagaagaagaaaaaagaagagaaggcaagggagaaagaattg
aaaaagcaaaaggctttagagaaagctgctaaattgcaagctcaacaagcatcgaatact
caaaaaaagagtgaaaagaaaacggtaaagcgtggtggggaggaagagaatcccgaggag
tttattgaccctcaaacgccttccggcgagaagaaaagaatgtctagtcaaatggcaaag
cagtatagtcctgctgcagttgagaaatcgtggtatgaatggtgggagaaatccgggttc
tttgtagcagatgcgaagagctccaaaccctcatttgttattgtcttgccacccccaaac
gtgactggtgccctccatataggacatgcccttactgctgctgtagaggatacaattatt
cgctggcggagaatgtctggatacaataccttgtgggttcctgggatggaccatgctggg
attgcaacacaggtggttgtggaaaagaagataatgcgtgaaagaaaattaaccaggcat
gatattggtcgagagagatttgtatctgaagtctgggattggaaaaacagacatgggggc
actatcttacaacagttacgtcgtttgggtgcttctttagattggtctcgtgagtgcttc
acaatggatgagcaaagatcaagagctgtgacagaggcttttgttaggctttacaaggaa
ggccttatatatagagatttacgtcttgtgaattgggattgtgtgctacggactgctata
tctgatattgaggtagaccatattgaaatcaaagataggactccactaaaggttccagga
tatgagaaacctgtggaatttggcgttttaacttcatttgcttaccctttggaaggggat
cttggtgagattgttgtagctactactagggtggaaactatgcttggagataccgctatt
gctatacatcctgatgatccaaggtacaaacatcttcatggaaaatttgccattcatccc
ttcaatggaagaaagctccctataatttgtgatgcgattcttgttgatccaaagtttggg
acaggtgctgttaagattaccccggctcatgacccgaatgattttgaggttggaaaacgt
cataatcttgagttcatcaacatttttacagatgatgggaaaataaacactgatggtggc
ccagagttttccgggatgccacgatttaacgctcgagaggcagttactgaagcattgcaa
aagaagggactttatagaggtgctaaagataatgagatgcgtcttggcatatgttcaaga
accaatgatgtagtggagccacttataaagcctcagtggtatgttaattgcagtagtatg
gcaaggcaaggtcttgatgctgtcgtggatgaagaaaacaagaagattgagatcatccca
aaacagtattctgctgactggaagagatggcttgaaaacattcgtgattggtgtgtctcg
aggcaactttggtggggtcaccgtgtccctgcatggtatgtcacgctggaggatgatgag
cggaaggagcttggtgcttacaatgaccactgggtggttgcaagaaatgaggatgaggct
caggtggaggctagccgaatatataatgggaagaagtttcatttaagtcaagatcctgac
gtgcttgatacatggttttcttctggtctatttccgttaactgttttgggctggcctgac
gatacagaagatctaaaggcattttatccaacttcagtgttggaaactggccatgatatt
ctctttttctgggttgctcgcatggtaatgctgggaatgaagttgggtggtgatgtacct
tttagaaaggtttatttgcatcccatgattcgtgatgcacatgggcgcaagatgtctaag
tccttgggaaatgtcatcgatccgcttgaagtaataaatgggatatccttggaaggtctt
cagaagaggctagaagagggtaacttagatcccaaggaactaactgttgctaaagaggga
cagacgaaagactttcctaatggtatttctgaatgtggtgctgatgctcttcgctttgca
cttatttcttacacagctcagtctgataaaataaatctggatatcctaagggtggttggg
tatcgtcagtggtgtaataaattgtggaatgctgtacgatttgctatgagcaagcttggg
gatgattatgttccgcccacaaatgtaaatccggatgacttgccattcagctgtcaatgg
atactctcagtattaaacaaagccatatccaaaactattacggctttggagtcatatgaa
ttctcagatgcagcaagtactgtgtattcatggtggcaataccaactgtgtgatgttttt
attgaagcaattaagcctttcttttctgggagtgatccaaagtctgagtctgagaggagt
tttgctcaagacacactttggttatgtcttgacaatgggttgcgattgcttcatcctttt
atgccatatgttacggaagaattatggcagcgccttccttcatcaaaggactgtacaatg
atagaatccattatgatatgcaagtacccatcaattgtagagggctggacaaatgaaaca
gtggaatatgagatggatcttgtagattctgcagtgaaatctctcaggtcacttgcaaat
gaaagacgtgaaaggcgaccagcttttgtgctttgcagaaatgcggcatttgcagagatt
attgacagccatcaacgcgaaattattactcttgccaatttatcaactttgacggtaatt
ggtgagaatgatgctactccagttggatgtgcagtatctgttgtaaatgaaaacctttct
gtttatcttgagcttcgaggaactctttctccagaggcagaacttgaaaagataaggaaa
aaagtggatgagattcaaaagcaacatgacaagctgtccaaggtcacaagcgctactggc
tacaaagaaaaggttcctgaacacatccagcaggagaatgttgcgaagctagcctcgctc
atgcaggagattttgtctcttgaagaagcccgccaacatattgaagctcaagccaacacc
aatcacgattaa
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