Castanea sativa (European chestnut): 142619996
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Entry
142619996 CDS
T11266
Name
(RefSeq) uncharacterized protein LOC142619996
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csaa04131
]
142619996
03029 Mitochondrial biogenesis [BR:
csaa03029
]
142619996
Membrane trafficking [BR:
csaa04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
142619996
Mitochondrial biogenesis [BR:
csaa03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
142619996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
TruB_C
Motif
Other DBs
NCBI-GeneID:
142619996
NCBI-ProteinID:
XP_075649543
LinkDB
All DBs
Position
12:39165054..39176392
Genome browser
AA seq
785 aa
AA seq
DB search
MMGLSGPHDQTHLSSSPSNHFHHHHHSGRNVFHLIALREISPRTKHVPKRRWGEASKPGP
KTEATRDARRGLLSWVEAETLRHLSAKYCPLVPPPRSTIAAAFSPDGRTLASTHGDHTVK
IIDCQTGRCLKVLSGHRRTPWVVRFHPLHPEIIASGSLDYEVRLWDANTSECIGSRDFYR
PIASIAFHAKGDILAVASGHKLYIWQYNKRGEASHPNFILKTRRSLRAVHFHPHAAPFLL
TAEVNDLDSSDSSMTRATSLGYLRYPPPAVFVANAPSSERVSLTAELPLVSLPFLFVPSF
AIDGSTSMQVEPSPSMQFQVDANEVQQHYNSMVSPTEAFRTIPTDSHSGIEDAADNHLPS
GTGNAVYDPTVDAMETDEIQPVGRSQQGSSTNLDTIGGVNNAIRGVPVYIPNRLDLAEIG
HHQFLPERDPSSWELPFLQGWLMGQSQADVPSVLPLNGDGSSPEPSAQYINSSILASHLS
THNMTMPGGISLSGISGRSSLQNRFSNSHLSVSDSVEGAAQVNAPSDWVDTQPIISRIQS
EITTSLAAVATAELPCTVKLRVWPHDVENPFALLNAERCCLTIPHAVLCSEMGAHFSPCG
RFLAACVACMLPHMEADPGYQTLIHQDPGAGTSPTRHPVSAHQVIYELRIYSLEKATFGL
VLVSRAIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTLPIYTILEVYRVS
DMELVGVLPSAEDEVNVACFHPFAGGGLVYGTKEGKLRVLQCDGARGVNCTGSNYIPEEN
MTLVG
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgatgggtctatctgggccgcacgatcagacccatctctcatcctcgccttccaatcat
ttccaccaccaccaccacagtggtagaaatgttttccatttgatagcgctgagggagatc
tctcctagaacaaagcatgtgcctaaaaggcggtggggagaggcttctaaacctgggccc
aaaactgaagcaaccagagatgcaagacgtggtcttctttcatgggttgaggcagagaca
ttgcgccatttatccgctaagtactgcccattggtgcctcctccaaggtcaactattgca
gcagcattcagtcctgatggaagaacacttgcttctacacatggtgaccatactgtaaag
ataattgattgtcaaactggacgttgcttgaaggtcttaagtggtcataggaggactcct
tgggtggttaggttccatcctttgcatccagaaataattgcgagtgggagcttggattat
gaagttcgattatgggatgcaaacacatcagagtgtataggatcacgcgatttttatcgc
cctattgcatccattgctttccatgctaaaggggatatccttgctgttgcatcaggacac
aagctatacatatggcagtacaacaagagaggagaagcttcacacccaaactttatatta
aagacaaggcgttcacttcgagcagtgcattttcaccctcatgctgctccatttttatta
actgctgaggtcaatgatcttgactcttcagattcctcgatgacacgtgcaacatctttg
ggttacttgcgatatcctcctccagctgtttttgtggcaaatgctccttccagtgaacgt
gttagtttgactgctgaactacctcttgtatccttacctttcttgtttgtgccttcattt
gccatagatggttcgactagcatgcaagtcgagccttctccttcaatgcagtttcaagtg
gatgcaaatgaagtgcagcaacattataatagtatggtttctcctacggaggcatttcgt
actattcctactgactcacacagtggaatagaagatgctgctgataatcatttacctagt
ggaacaggaaatgctgtttacgaccccacagtggatgcaatggaaactgatgaaatacag
cctgttgggagaagccagcagggaagctctactaacttagatactattggtggtgtcaat
aatgcgattcgtggagtacctgtgtatattccaaaccgcctggatcttgctgagattgga
caccatcaattcttacctgagagagatccaagtagttgggagctaccgtttttgcaagga
tggttaatgggtcaaagccaagctgatgttccttcagtgctgcctcttaatggtgatggc
agtagtcctgagccatcagctcaatatataaactcttccatcttagcatctcatctgtct
actcataacatgacaatgccaggcggcatcagcctgtctggcatttctggaagatctagc
ttgcaaaatcgcttttcaaactcccacctttctgtatctgattctgtggagggtgctgct
caggttaatgccccaagtgattgggttgatactcaacccattatcagtagaatccagtca
gaaatcaccacctcactggctgctgttgcaactgcggagctcccttgcactgtgaagcta
agagtatggccacatgatgttgaaaatccttttgccctacttaatgctgaaagatgttgc
ttaaccataccccatgctgtcctctgtagtgaaatgggtgcccatttttctccttgtggg
agatttttagctgcctgtgttgcatgcatgcttcctcatatggaggctgatccaggatat
cagactctaatccatcaagatcctggagctggaacatccccaacacgacatccagtttca
gctcaccaagtcatatatgagcttcgaatttattctcttgagaaggcaacctttggtttg
gtgcttgtatcaagagccattagagctgctcattgtttgacttctatccagttctcacct
acatctgagcacatattacttgcctacggtcgacgtcacggttctcttcttaaaagcatt
gtcattgatggggaaacaacattacctatttacactattctggaggtttacagagtttca
gatatggaacttgtgggagtgcttccaagtgcagaggatgaggtcaatgttgcttgcttt
catccatttgctggaggaggtcttgtttatggaacaaaggaagggaagcttagggtttta
cagtgtgatggtgctcgtggtgtgaattgcactggatcaaattacattcctgaggaaaac
atgactcttgtaggatag
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