Castanea sativa (European chestnut): 142620127
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Entry
142620127 CDS
T11266
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
142620127
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csaa04040
]
142620127
Ion channels [BR:
csaa04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
142620127
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
142620127
NCBI-ProteinID:
XP_075649663
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Position
12:complement(8361573..8369993)
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AA seq
786 aa
AA seq
DB search
MEMGLGGRGVRRDRCDRSGLQESVSNDVLDLLPSNQFGMDISTNFMAITGWLEDFQADYG
GNEVGTSDGSYQSFAGLNFIWNNALKYQSFSGNMGVDYKFDVVGGIRGRSGKMEVGDTSY
RGGFGSDCNVDGILSLGNETPGVSSQQSEACPKVVSLSLELYITVFFLFFLCRSPDCLID
TKEEHFPANNGLHSQEKALLKILHPQNLFLCWWNKIFVVLCVIAVSLDPLFFYIPVTSED
NKCVRLDKKLWTTAIVLRSISDIIHIVHMILQFRTGFIDEASQKLGKPVLVKDARTIARR
YIWPYFLIDILVILPIPQVVVSVIFSARGAKYLNTRKLMNSILFFQYVPRVLRIYLSWRE
LMRSARKFAKTPVWVKGLFNFFLYILASHVLGAFWYFFSIQREMACWDIACENHPRCVHS
SLNCDHSLGNYTFLDDFCPIKTPNTTLFDFGIYLGALQSGVAESTDFPQKFFQCFWWGLR
NLSSLGQNLQTSNYIWESCFAIFISVAGLLLFLYLIGNVQTYMQLATTRSEEIRRKMTLK
EIDIELWISKNDLPQNINEEIMQSVKDILEGDKDANVGSLLLNVRKKSNIKRHLCLDMLK
RAPRFQNINNQLLQVFLDNLKPVLHSESSYIFREGEPLDAMIFVTQGIAWTYTSSRGDKS
ECLGKGQFYGEEILEWGFKALSLTDLSNLPISPKTVRCHTKVEAFALRASDLKTILTQNW
WQLSKMLSHITGSNLERWKPLAASSILAAWRRSPRYRAWQRSHRHQEDVLIKSVQWLTGR
ELTKFL
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggagatgggtttgggaggtcgtggtgttcgcagggataggtgtgataggagtgggttg
caggagtctgtttcgaatgatgttcttgatcttttgccttcgaatcaatttggtatggat
ataagtaccaattttatggctatcacaggttggttggaggattttcaagctgattatggt
gggaatgaggttgggacaagtgatgggagttatcagtcattcgcggggttgaattttatt
tggaataatgctttaaagtaccagagtttttctgggaatatgggggttgattataagttt
gatgtagtgggtggaattagggggcgttctgggaagatggaagttggtgatacatcttac
cgtggcggttttggatcagactgtaatgtggatggtattctgagtttaggcaatgaaact
ccgggagtttctagccaacaaagtgaagcttgtcctaaagttgtgagcttgagccttgag
ttatatatcactgtttttttcttattttttttatgtaggagtccggattgcctgatagac
actaaggaggagcactttcccgctaataatggattacattcccaggaaaaggcattactg
aaaattcttcacccacagaatttgttcctttgttggtggaacaaaatatttgtcgtgttg
tgtgtgattgcagtatcactggatcctttgttcttttacattcctgtaaccagtgaagat
aacaagtgcgttaggttagacaaaaagttgtggaccacagctattgttttgagatcaatc
tccgatatcattcacatagttcatatgattttgcaatttcgcactggttttatagatgag
gcctctcagaaacttggaaaacctgtgttagttaaagatgctaggacaatagctaggagg
tatatctggccatatttcctgatcgacattcttgttattcttcccatcccacaggtggtt
gtttcagttatcttttcagcgagaggcgcgaaatatttgaatacaagaaagttgatgaac
tctattcttttctttcaatatgtgccaagagttcttcgaatctacctatcctggagggaa
cttatgaggagtgccagaaagtttgctaaaacccctgtatgggttaaaggtttattcaac
ttctttctatacatccttgccagccatgtattgggagccttttggtatttcttttcaatt
caaagagaaatggcttgttgggacatagcctgtgaaaatcatccaagatgtgtccacagt
tctttaaactgtgatcacagtttaggaaactacacattcctagatgatttttgccctata
aaaacaccaaatacgacactatttgattttggaatatatcttggtgcccttcagtcaggt
gttgcagagtccacagactttccacaaaaattctttcagtgtttttggtggggcctgcga
aatctaagttctcttggtcaaaacctccaaacaagtaactatatttgggaaagctgcttc
gcaatttttatttctgttgctggcttgctactatttttatatctaattggaaatgtgcag
acatatatgcagttggcaactacaaggtcggaggagataagaaggaagatgacattgaaa
gaaatagatatagaattatggatctcaaagaatgatctccctcagaatataaatgaagag
atcatgcagagtgtaaaagacatactagaaggtgacaaagatgctaatgtaggaagtctg
cttcttaatgttcgcaagaaatctaatataaaacgccatctatgcttggatatgctgaag
agagctcccaggtttcaaaacataaataatcaacttttgcaagtgttcctcgacaatctc
aagccggtgctccacagtgagagcagctatatttttcgagagggagaaccacttgacgca
atgatctttgtcacgcaaggcattgcatggacctatacaagtagtcgtggtgataaaagt
gagtgtcttggtaaaggtcaattctatggtgaagaaattctagaatggggtttcaaagcc
ctctccttaactgacctatccaacctccccatctcgcccaagacagttagatgccataca
aaagttgaagcttttgctttaagggctagtgacctcaagactatactcactcaaaactgg
tggcagcttagcaagatgctcagccacatcactggatcaaacttggagaggtggaaacct
ttggcagcttcatctatactagcagcctggcgacgcagcccccgctatcgtgcctggcaa
cgaagccaccgccatcaagaagatgtgcttataaagtctgtgcagtggcttacgggacgg
gaactcaccaagtttttgtaa
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