Castanea sativa (European chestnut): 142620218
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Entry
142620218 CDS
T11266
Name
(RefSeq) uncharacterized protein LOC142620218
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
142620218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csaa03000
]
142620218
Transcription factors [BR:
csaa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
142620218
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
142620218
NCBI-ProteinID:
XP_075649735
LinkDB
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Position
12:complement(13990012..13998339)
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AA seq
737 aa
AA seq
DB search
MASERVRVDQSFKNKTSVVDIHILVVDDDTTSLAIVSAMLRTWKYDVVAVRNPLDALATL
RMQKFDLVITDLHMPVMNGLELQKQVEEEFKLPVIMMSADDGENAMLKSLEGGAAFYMVK
PVSPEDLKNLWQYAVAAKRGKSVVIEDVKNIPAKSSVVSCENKQSAASSVNQEKQDKKDS
KRKGAPKKGKEDGNQKSRGARKRPKVVWTTSLHNRFLEAIKHIGLDKAVPKRILEIMNVR
GLTRENVASHLQKYRLFLKKVAERGLYTSKGLSMRSNFASGLPPSLIFKNFQQNYPQFPE
HQQRRTSMFQPGFGGNFTTLNGAVLGGIPSNRASSSGAQFGYGDSFNAFNIGPAHLPVKH
NSSSSNFVPQLGQEQWRSSNDLQQPLFGNINSPPLYHANRPVFANNVGLNFPLLGDMTCG
PKNNATDGLVNTSNCNDTYPQEAQPIRPHILNDSMLNYNFYTPGILHPSYIPETKNNMGS
LNSSNAAPNFGNNNGVNAGIQITNGREIIGTNEKSFNDNGTSNGPCSGYGMLNGHNDNIG
LATMGNGTFGKYMEQGESSSAGFENANQLLPWFNNVNQQENALPIFQTKSQQQPNLVNGG
ENDYSYDDLLNAISLMPNLGEDDLNELFLEETYNQPPSQQQGVEEEPFDEDPLVNELQIL
ELSGSSSLEENPPLSEPAFSQNQGGEQLVDLDFDVDMFISVESPDQNLNQQQLMSSNDLY
GMSQVENNVNTPLESQA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgagagagttagagtagaccaatctttcaaaaacaaaacctccgttgtcgat
atccatatattggttgtagatgatgatactacatctcttgccattgtttctgcgatgctt
agaacatggaaatatgatgttgtggctgttagaaacccactggatgctttggctaccctc
cggatgcaaaaattcgaccttgttattacagatctgcatatgcctgtaatgaatgggctt
gaattgcaaaagcaagtcgaagaagaattcaagctgcctgtgattatgatgtccgctgat
gatggagagaatgccatgttgaagagtttagagggtggagctgctttctatatggtaaaa
ccagtaagcccagaagacctcaaaaatttatggcagtatgctgttgcagctaaaagaggc
aaatctgttgttatcgaagacgtcaaaaacattccagctaaatcatcggttgtttcttgc
gaaaataaacaatctgcagcatcatctgtgaatcaagaaaaacaagataaaaaggattcc
aagagaaagggtgccccaaaaaaaggaaaggaagatgggaatcaaaagagtcgtggagcc
cgtaaaaggccaaaggtggtttggacaacctcacttcacaaccgattcttggaagccata
aagcatataggcttggataaggctgtgcctaagaggattctcgagatcatgaatgtgcgg
ggcttaactagagagaatgtcgccagtcatttacagaagtatcgtttattcctaaagaaa
gtcgcggaaagaggtctttacacctcaaagggcttatctatgagatcaaactttgcctct
ggtcttcctccatcactcatattcaaaaatttccaacaaaactatccccaattcccagaa
catcaacaaaggagaacatctatgttccaaccaggatttggaggtaattttacgacactt
aatggtgctgtccttggtggtatcccttctaatagggcatcttcaagtggagctcagttt
gggtatggggattccttcaatgctttcaacataggccctgcacatcttcccgttaagcat
aattcttcaagttccaactttgtgcctcaactaggacaagagcaatggcgctcatcaaac
gatcttcagcagccattgtttggaaacataaatagtcctcctctttatcatgcaaatcgt
ccagtttttgctaacaatgttggattgaattttccattgctgggagatatgacatgtggt
cctaagaataatgctactgatggtctagtgaatacttcaaattgtaatgacacataccca
caagaagctcaaccaattaggcctcatattctaaacgattccatgttgaactacaacttt
tacacacctggaattctccaccctagttatattccagaaactaagaacaatatggggtcc
ctcaacagttctaatgcagctccaaattttggcaataacaatggtgttaatgctggaatc
caaataactaatgggagagagataattggaacaaatgaaaagagtttcaatgacaatggg
acatcaaatggtccttgcagtggctatggaatgttgaatgggcacaatgacaacatcggt
cttgcaacaatggggaatggaacttttggtaaatacatggaacaaggagagtcttcttcc
gctgggtttgagaatgcaaaccaattgctaccatggtttaacaatgtcaatcaacaagaa
aatgctttgccaatatttcaaacaaagtcacagcaacaacccaatcttgtgaatggagga
gaaaatgactattcctatgatgatctgctgaatgccatttctctcatgccaaacttaggg
gaggatgatctcaatgagcttttcttggaggaaacctacaaccaacctccttctcagcaa
caaggtgtggaagaagaaccttttgatgaggatcctcttgtgaatgaactccaaattctt
gaactatctggttcatccagtcttgaagagaatccacctttaagtgaaccagcctttagc
cagaatcaaggcggtgaacaactagtggacttggactttgatgtcgacatgtttatttcg
gtggagagccctgatcaaaacctcaaccagcaacaactcatgagctcaaatgatctctat
ggcatgagtcaggtggagaataatgttaataccccgttggaaagccaggcatga
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