Castanea sativa (European chestnut): 142620591
Help
Entry
142620591 CDS
T11266
Name
(RefSeq) autophagy-related protein 11-like
KO
K08330
autophagy-related protein 11
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
142620591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csaa04131
]
142620591
03029 Mitochondrial biogenesis [BR:
csaa03029
]
142620591
Membrane trafficking [BR:
csaa04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Scaffold protein
142620591
Mitophagy
Scaffold proteins
142620591
Mitochondrial biogenesis [BR:
csaa03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
142620591
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
IKKbetaNEMObind
RAG1_ZnH2
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
142620591
NCBI-ProteinID:
XP_075650062
LinkDB
All DBs
Position
12:complement(35799723..35805912)
Genome browser
AA seq
664 aa
AA seq
DB search
MEWFSLQYDIPSGLVTYLACMVKDVNIVKKLVDECLSSQLSSSLRPHDAVSALGLMYDVH
DRNHLPKMQACDREISKLLDFCRDKKNEMNLFLHNYMQQITIVTVVVKDAKLQFPVFRGA
LMRQDDQFMELKLLRGLGPAFRACLAEVVRRKASMKLYMGMAGQLAEKLATKREVEVRRR
EEFLKIYSSYIPRDVLGSLGLFETPNQCDVNIAPFDTGLLDIDISDLDRYAPEHLARLPL
KGEKHGSFKGSLSLSNDSSHSAEPEEISVDTLEKYDSEELLEGCELVEVAGTSKMEVENA
KLKADLASAIAFNCLHWAEVEYESLNDDKLDHLLKNAQEKTSEALHLKDEYVKHLQSMLR
MKQTQCVSYEKRIQELEQRLSDQYLQGQKISNNNDTNDFALLAERADDCKREVLGSEAHI
PCISTTDPMDEISCISSSLNAKLGLLTGQHGKAREGVDENMMDSFGMQNSQLDSSMVEPN
RDELLVSDKDGKDKMIGQLGMSLTNSSTAESMAGPLIALPSDTQAELGLNSKVNSDLLLE
LQSALADKSSQMTETETKLKATFDEFSLLRRELETSRKLLHESQMNCAHLENFLHEAREE
AQTHLCAADRRASEYSALRASALKMRGLFERLRSCINPPGGVAAFADSLQTLAQSLAKCS
CLLC
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggagtggttcagtttacaatatgatataccatctgggctagtaacgtacctggcttgt
atggtcaaagatgtcaatatagtgaagaaactagtggatgagtgtctgtccagccaatta
tcttcatccctccgtcctcatgatgcagtttcagccttgggtcttatgtatgatgtccat
gacaggaatcacctgcctaagatgcaggcttgtgatcgtgaaatttctaagctattggac
ttctgtagggataagaagaatgaaatgaatctctttctacataattacatgcaacagata
acaattgtcactgttgtcgtcaaagatgctaagttacagtttcctgtttttagaggggca
ctgatgcgtcaggatgatcagtttatggagttgaagttactccgtgggcttggccctgca
tttcgagcctgccttgcagaagttgtgagaagaaaggcttctatgaagctttacatgggc
atggccggacaattggctgaaaagcttgctacaaagagggaggttgaggttcggagacgg
gaggagtttctgaagatttatagttcttacatacccagggatgttttaggatcccttgga
ttatttgaaacccccaatcaatgtgatgtcaatatagctccttttgatactggtttactt
gatattgacatttcagacctagatcgatatgctcctgagcatttggccagactgcctttg
aagggtgagaagcatggaagctttaaaggttcattatctttgtctaatgacagttcccat
tcagctgagcctgaggagatttctgtggacacccttgagaaatatgactctgaggagctt
cttgaaggctgtgagttggttgaggtagctgggactagcaaaatggaagttgagaatgca
aaactgaaggctgaccttgcttctgcaattgcctttaattgtttgcattgggctgaagtt
gaatacgaatctctgaacgatgacaaactggatcacttattgaaaaatgctcaagaaaag
acatctgaagccttgcatctgaaagatgaatatgtgaaacatctgcaatctatgcttaga
atgaagcagacacagtgtgtgtcttatgagaagcgcattcaagaattggagcagagattg
tctgatcaatatttgcaagggcagaagatttcaaataataacgatacaaatgattttgca
cttttggctgagagggctgatgattgcaagcgagaagtcttaggtagtgaagcccacata
ccttgcatatctactactgaccccatggatgagatttcttgtatctcaagttctttgaat
gcaaaattggggttattaactgggcaacatggcaaagctcgagaaggagtggatgagaat
atgatggattcctttggaatgcaaaattctcagcttgattcctcaatggtggagccaaat
cgtgatgaacttcttgtcagtgataaagatgggaaagataagatgataggacagttgggc
atgtcccttacaaacagttccactgctgagagcatggctgggcctctgattgctttaccc
tctgatacacaggctgagctggggttaaattccaaagtcaatagtgatcttttgttggaa
ttacaaagtgcacttgcagacaagtcaagccaaatgactgaaactgaaaccaagcttaaa
gctaccttcgatgagttttccttgcttaggagggagttggaaacgagtcggaagctcctt
catgaatctcagatgaattgtgctcacttggaaaacttcttgcatgaggcaagagaggaa
gcccagacccatctttgtgcagctgatcggagggcctcagagtatagtgcactgcgcgca
tctgctttgaaaatgcgtggcctttttgaaagacttcggagctgtattaatccacctggt
ggagtggccgcttttgcagattcgttgcagaccttagcacaatctttggctaagtgcagt
tgtttgctttgttag
DBGET
integrated database retrieval system
