Castanea sativa (European chestnut): 142621142
Help
Entry
142621142 CDS
T11266
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
142621142
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csaa04040
]
142621142
Ion channels [BR:
csaa04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
142621142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Ctr
ArlX
DUF2254
Motif
Other DBs
NCBI-GeneID:
142621142
NCBI-ProteinID:
XP_075650567
LinkDB
All DBs
Position
12:complement(8641219..8650305)
Genome browser
AA seq
615 aa
AA seq
DB search
MSNQENPQENGEIMNRETEIEGPGNINGPVHEAAKLQHSNNDNHEGERRTKRIILRHVWN
YLFLFSCVIAAIVDPLFFYIPVINDSERCLLLEKKLWIAVFVFRIVTDVIYLVHIALRSW
MVFKICVKTRSNICCSNTNACASVRRCFSFLIDIFVVLPIPQVVFPFIFKEMRSTRPSEI
IKSLNTLVLFQYVPRIRQIYLSWKNLPRNAGKLDGWIKALFNFFLFILASHVIGAFWYFF
SIEREIACWHLVCGNQNGCGRNSFSCANSSGNYTSLDASCPINAPNTTLFDFGIFLGALQ
SGIVQSSNLPQKFFFCFWWGLRNLSSFGQGLQTSNYLWESCFAIFISIFGLLLFLYFLEN
LKTYMRLATKSSEEDRKKAEKERRKEKQEEEKKKLADQRQNKQKKAKDDIQVWIQKNEFC
DDIKNRINEIVDEVLEEDINVNAENLFVVLPAKLKNDIKSHLCLDILRNVPALRERMNEP
ELKMICDCLKPVSYEECIYIVREGEPLDRAYFITRGTAWTYNTTRTNGEATTSSSQSKWL
EKGGFFGEELIEWGLDLGQQASSDIFNLPLSSKIFKSHTKVEAYALMANDLKNIVSQIND
AASKLHAALGHNKEN
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaccaggagaatccgcaagagaacggtgaaattatgaatagggaaactgagatt
gaaggcccagggaatattaacggaccagtacatgaagctgctaaattgcaacattccaat
aatgataatcatgagggtgaaagaagaactaaaaggataattcttagacatgtatggaat
tatctcttcctattctcgtgtgtgattgcagcaattgtggatcctctattcttttacatc
cctgtgatcaatgatagtgagaggtgccttttgttggaaaaaaagttgtggatcgccgtt
tttgtttttcggatagtcaccgatgtcatttacctagttcatattgctttgcggtcgtgg
atggtcttcaagatctgtgtaaaaactaggtcaaatatttgttgttctaatactaacgct
tgtgcaagtgttcggagatgcttctccttcctcatcgacatttttgttgttcttcccatc
ccacaggtggtatttccattcatttttaaagaaatgagaagcacgagaccttcagaaata
ataaagtcactgaacacccttgttctctttcaatatgtgcctagaattcgtcagatctac
ctatcctggaagaaccttccgagaaatgctggcaaacttgatggatggattaaagcttta
ttcaatttctttctgttcatccttgccagtcatgtaattggagccttttggtactttttc
tctattgaacgagagatagcttgctggcacttggtctgtggaaatcaaaatggatgcggc
cgaaattcttttagttgtgctaatagttcgggaaactacacatccctagatgcttcttgc
cccataaatgcaccaaatacaacactatttgactttggaatatttcttggagccctccaa
tctggtattgtgcaatcctcaaatcttccacaaaagttctttttctgtttctggtgggga
ctacgaaatctaagttcttttggtcaaggcctccaaacaagtaactacctctgggaaagt
tgctttgcaattttcatttcaatcttcgggttgctgctatttttgtatttcctcgaaaat
ctgaagacttatatgcggttggcaactaaaagctcagaagaggaccgcaagaaagctgag
aaggaacgcagaaaagagaaacaggaagaggagaagaaaaaattggcagatcaaagacag
aataaacaaaaaaaagcaaaagatgatatacaagtatggatccaaaaaaacgagttctgt
gacgacataaagaacagaattaatgaaatcgttgatgaagtattggaagaagacataaat
gtcaatgcggagaacctgttcgtcgttcttcctgcaaaacttaaaaacgatatcaagagc
catctctgcctggatattctaaggaatgtgccagcgcttcgtgaaaggatgaacgagcca
gagttgaaaatgatatgcgactgtctgaagccagtttcctacgaagagtgcatctacatt
gttcgtgagggagaaccacttgatagggcgtacttcatcacgcgaggcactgcatggacc
tacaatacaactcgtactaatggagaagcaactactagctcctcacaatctaaatggctt
gaaaagggtggcttctttggagaagaacttatagaatggggattggatttgggacaacag
gcctcgtctgacatattcaatctcccactttcttcaaaaatctttaaatcccatacaaaa
gttgaagcctatgctctaatggccaatgacttgaagaatatagtctctcaaattaatgat
gcagcttctaagttacatgcagccttgggccacaataaagaaaattag
DBGET
integrated database retrieval system
