KEGG   Castanea sativa (European chestnut): 142621173
Entry
142621173         CDS       T11266                                 
Name
(RefSeq) uncharacterized protein LOC142621173
  KO
K03505  DNA polymerase delta subunit 4
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa03030  DNA replication
csaa03410  Base excision repair
csaa03420  Nucleotide excision repair
csaa03430  Mismatch repair
csaa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    142621173
   03410 Base excision repair
    142621173
   03420 Nucleotide excision repair
    142621173
   03430 Mismatch repair
    142621173
   03440 Homologous recombination
    142621173
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csaa03032]
    142621173
   03400 DNA repair and recombination proteins [BR:csaa03400]
    142621173
DNA replication proteins [BR:csaa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    142621173
DNA repair and recombination proteins [BR:csaa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      142621173
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     142621173
SSDB
Motif
Pfam: DNA_pol_delta_4
Other DBs
NCBI-GeneID: 142621173
NCBI-ProteinID: XP_075650606
LinkDB
Position
12:complement(18717907..18718854)
AA seq 123 aa
MATTSGNIKEFYRQRKKSGVSKPSNSKISTKKSLKNAATFGSDITQPSALISHGSPDLKD
DNDENEDILRKFDMNMAYGPCLGMTRLARWERARSLGLNPPEEIEGLLKAGKVRSDCLWD
GRV
NT seq 372 nt   +upstreamnt  +downstreamnt
atggcaacgacatcaggaaacatcaaggaattctacagacagaggaagaagagcggcgtt
tcaaagccctccaactccaagatttccaccaagaaatcgctcaaaaacgccgccactttc
ggctccgatatcacccaaccttcggctctcatttctcacggctcccctgatctcaaagat
gacaatgatgagaatgaggacattttacggaaattcgacatgaacatggcatatggaccg
tgccttgggatgactcgactggcccgttgggagcgtgctcggagtctaggtttgaacccg
cctgaagaaatcgagggccttttgaaagccggtaaagtccggtcggattgcttgtgggat
ggccgcgtgtag

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