Castanea sativa (European chestnut): 142621182
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Entry
142621182 CDS
T11266
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
142621182
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csaa04040
]
142621182
Ion channels [BR:
csaa04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
142621182
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Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
142621182
NCBI-ProteinID:
XP_075650616
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Position
12:complement(8735233..8744484)
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AA seq
630 aa
AA seq
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MSHSSGNRRRCKGGSFRIHDVEMQDDRNEDGGSSSSLKEPPKWFFRSWRIIFGVSCVIAV
ALDPLFFYVPVIKEDKKCIGIDKKLRAISLILRSVTDIIGIINIILQFHDEYTYIDETSG
MVVKDFRKIAKTYLWPYFVIDILVILPFPQVIILVIFRQLKGSKSLNKRKLLTSFVLFQY
VPRVIQIFQSWKDPKKRVDKSSETPKRVKAAFNFFLYIISSHVLGAFWYFLSIERETACW
HRACEIHTGCIQSSFKCDDRLHSLGNYTFLTDVCPINPPDKTRFDFGIFLGALQSGVVQS
KNFSEKFFHCFWWGLQNLSSLGQNLETSNYVWEKCFAVLISLFGLLLFTYFIGNLQLYMQ
LDSSKSEEAKKKREGEEEMRARKEREEKEESKKAEERMDLEMKEKKRTIEIWMFKYRLPG
EMKRQIMQNAIQIFKKNKNLVHVENLLRQLPEGLSNSVKRHIYLDLLKKVPALQNMDEQL
LLKICDSLRPVYYNEQSYIVREGDPIDAAIFITDGVAWTYSTTNNGEAIGGPSSLAERLE
KGNFFGGELLEFVLKNPSLPKLAISPRTVKAHGPIEGFALMAEDLKNIVSKNWKCVGIGQ
LEPFAAHVVQAAWRRHHENKNLEKSSQGGR
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatagcagtgggaatcggcgaagatgtaaaggtggaagctttaggattcatgat
gttgagatgcaagacgacaggaatgaagatggaggatcaagcagctcattgaaagagccg
cctaagtggttcttccgatcttggaggataatatttggagtgtcgtgtgtgattgcagta
gcattggatcctttgttcttttacgttcctgtgatcaaggaagataagaagtgcattggg
attgacaaaaagttgagagccatatctcttattttgcgctctgttaccgatatcattggc
attataaatattattttgcaatttcatgatgagtatacctatatagacgagacctcggga
atggtagttaaagattttcggaaaatagcaaagacttatttgtggccatacttcgtgatt
gacattctcgttattcttcccttcccacaagtcataattttagttatttttcgacaactg
aaaggctcaaaatctttgaataaaagaaagttgttgacttcctttgttctcttccaatat
gtgccaagagttattcaaatcttccaatcctggaaagatcctaagaagagagtcgacaaa
tcatctgaaacccccaaacgagtaaaagctgcattcaatttctttctctacatcatttcc
agtcatgtattgggagccttttggtattttctttctattgaaagggagactgcttgctgg
cacagagcctgtgaaattcatactggatgtatccaaagttctttcaaatgtgatgacaga
cttcacagtttaggaaattacacatttctaactgacgtttgcccaataaatccaccagat
aaaacgcgctttgattttggaatatttcttggagcccttcagtctggtgtagtgcagtcc
aaaaatttctctgaaaaattctttcattgtttctggtggggcttacaaaatctaagttct
cttggtcaaaacctcgaaacaagtaactatgtctgggaaaaatgctttgcagttctcatt
tctctctttggcttgctattgtttacatatttcattggaaatttgcagctatacatgcag
ctggactcttcaaaatcggaggaagcaaaaaagaagagggagggggaggaggaaatgagg
gcaaggaaggagagggaggagaaggaggaaagcaagaaggcggaggaaagaatggatttg
gagatgaaggagaaaaaacgaacaatagaaatatggatgttcaaatacaggcttcctgga
gaaatgaaaagacagattatgcagaacgcaatacagatttttaaaaaaaacaaaaacctt
gttcatgtggagaacctgttacgtcagcttcctgaaggactaagcaattctgtaaaacgc
cacatctacttagatctactaaaaaaagtgccggcgcttcaaaatatggatgagcaattg
ttgctaaagatatgcgactctcttaggccagtctactacaatgagcagagctatattgtt
cgggagggagacccaattgatgcagcgatcttcatcactgatggcgttgcatggacctat
tcaactactaataatggtgaagcaatcggtggcccctcatcactcgctgagcgtcttgaa
aaaggtaacttcttcggaggagaacttcttgaattcgtgttgaaaaacccatccttgccc
aaacttgccatttctccaagaaccgtcaaagcccatggaccaattgaaggctttgctcta
atggccgaggacttgaagaatatagtcagtaagaactggaagtgtgttggcatagggcag
ttggaacccttcgcagctcatgtggtgcaagcagcttggcgccggcatcatgaaaataaa
aatcttgaaaagtcctcacagggcggcagataa
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