Castanea sativa (European chestnut): 142621335
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Entry
142621335 CDS
T11266
Name
(RefSeq) 25.3 kDa vesicle transport protein SEC22-1
KO
K08517
vesicle transport protein SEC22
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04130
SNARE interactions in vesicular transport
csaa04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
142621335
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
142621335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csaa04131
]
142621335
Membrane trafficking [BR:
csaa04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
142621335
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Gene cluster
GFIT
Motif
Pfam:
Longin
Pox_A31
Motif
Other DBs
NCBI-GeneID:
142621335
NCBI-ProteinID:
XP_075650767
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Position
12:13018985..13020718
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AA seq
221 aa
AA seq
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MVKLTIVGRVSDGLPLAQGPRYTIEENNNFLFYKQQAEFILKEISKGALAHSKMTIHIDH
HCFNHLVDNGIIFITLCDSSYPRKLAFHYLQDLQKEFEKFDNRLIEKITRPYSFVKFDSI
IGNIRRQYIDTRTQANLSKLNANKKQDVDIVNKHISEILERRQNAAISDRVFVSPQTVSS
IWSSPRLEVIALKWTPITTIVVVAVVLLWASLVLTDHIIIS
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggttaagctaacgatagttggaagagtgagcgatgggttgcctcttgcacaaggacct
aggtatacgattgaggaaaataacaacttcttattttacaagcaacaagcagagttcata
ctcaaagaaatctccaaaggagccttggcacattccaagatgaccattcacattgatcat
cactgcttcaaccacttggtcgacaatggaatcatcttcatcacattgtgcgattcttca
tatccaagaaaactagctttccattatctacaagatttgcaaaaggagtttgagaagttt
gataatagactcatagagaaaatcaccagaccatacagctttgtgaagtttgatagcatt
attgggaatatcagaaggcaatacatagatacaagaacgcaggccaacctatcaaagctt
aatgctaataagaaacaagatgtagatattgttaataaacacatatctgaaattttagaa
cgaaggcaaaatgctgcaatatcggatcgagtatttgtgtcacctcaaactgtgtcctca
atatggagttccccacgcctggaggtaattgccctgaagtggacgcctatcacaacaatt
gtcgtagttgctgttgttcttttatgggctagcttagtactcacagaccacatcataatt
tcatga
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