Castanea sativa (European chestnut): 142621614
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Entry
142621614 CDS
T11266
Name
(RefSeq) two-component response regulator ORR23-like isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
142621614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csaa03000
]
142621614
Transcription factors [BR:
csaa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
142621614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
142621614
NCBI-ProteinID:
XP_075651026
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Position
1:81022492..81028106
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AA seq
707 aa
AA seq
DB search
MTVEDQRGGVVSKDVSHYDKFPVGMRVLAVDDDPICLKLLDTLLRKCQYQVTTANQAVIA
LEMLRENRDKFDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSDTKLVMKGITHGA
VDYLLKPVRIEELKNIWQHVIRKKKIEPKDQNKSPNEDKARHGNSESGQGASSLGIADQN
GKNSRKRKDQNEDEEEEGDENGNDSEDPSSQKKPRVVWSVELHRKFVAAVNQLGLEKAVP
KKILDLMDVEGLTRENVASHLQKYRLYLKRISSVATQQANMVAALGGKDSSYLRMASLDG
FGEFRNLAGSGRLSSSTLSSYAPSGMFGRLNSPAGLNIRGITSSGLIQPSGQNLSSSINT
FGKLQPTLLPPNQSAGLYQGIPTSLELNQLQQSKCATGIGDFDPIKDSTGFTVSGSFPDN
RVTVGCSSSLLSRASSSPLMLQGNSQQTHNRGAFGNQSSLGVASLNPESFDLSIGGSSNF
VNHNRSDESWQGAVQLSRFSSNALPLSEPFNHDQMASNNLGISSTSPHIGNSPLEFPSTN
VVSGRLGDSGDVCQEGLIGNVVHNITYTSKQRWEEYKQDYNPNMNHSFSDINSMVSNNGI
VSPLGRSLDQNSAICGRSFDVSLIGQLNGGALSNAQHSEFENSAVDAKIKSNEDCLLGQT
KSQDGFIQNGYESLDDIMNAMMKREQNQTVLSDGEFGINAYSLGSCI
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgactgtggaggaccaaaggggtggcgtggtgagtaaagatgtgagtcattatgacaag
tttccagtgggtatgcgtgttttggctgtggatgacgaccctatttgcctcaaattgctg
gatactctgcttcgaaaatgccaatatcaagttacaacggccaatcaagcggtcatagca
ctggaaatgttgagggagaatagagacaagtttgacctggttatcagtgatgtgaatatg
ccagacatggatggtttcaagctccttgagctagtgggccttgaaatggaccttcctgtc
atcatgttgtcagctcatagtgataccaagcttgtgatgaagggaattactcatggtgct
gttgactatttgttgaaacctgttcggattgaagagctcaaaaacatatggcaacatgtg
atccggaaaaaaaaaattgaacccaaggaccaaaacaagtcccccaatgaagacaaggct
cgccatggtaacagcgagagtggacaaggtgcctcatcattgggtattgcagatcagaat
gggaaaaacagtaggaagcggaaggaccaaaatgaagacgaggaagaagaaggtgatgaa
aatggaaatgacagtgaagacccatcaagccagaagaagccacgggtagtttggtctgta
gagctgcacagaaagtttgtggcagctgtaaatcaattgggacttgaaaaggctgttcct
aagaaaattcttgacctgatggatgttgaaggacttacaagggaaaatgtggcaagccat
ctgcagaaatataggctctacctgaaaagaatcagtagtgtggcaactcagcaagctaat
atggttgctgcattggggggtaaagattcttcttacctgcgcatggcctcactagatgga
ttcggagagtttcgcaacttggctggatctggaaggctctctagctcaactctatcatca
tatgcaccaagtgggatgtttggtagactcaactcccctgctggtttgaacattcgagga
attacttcttctggacttatacaaccgagcggtcaaaacttgtccagctccatcaatact
tttgggaagctccagccaactttattgcctccaaaccaaagtgcaggtttatatcaaggg
attccgacatcattagagcttaaccagttgcaacagagcaagtgcgctacaggcattgga
gattttgatcccattaaggattcaacaggttttactgtctctggtagtttccctgacaat
agagtgactgttggttgctcaagtagtttattatccagggcctcaagcagtcctttgatg
ttacaagggaactcacaacaaacacataataggggagcatttggaaatcaatcttctctt
ggagtggcttcactgaatccagaatcttttgacctaagcattggtggttcatctaatttt
gtgaatcataatcgaagtgatgaaagctggcagggtgcggttcagttatccagattttca
tcaaatgctttgccattgagtgagccttttaatcatgatcaaatggcttcaaataacttg
ggtatatcttctaccagccctcatattgggaacagtccacttgaatttccttcaacaaat
gtagtttcaggtcgtcttggggattcaggagacgtatgtcaagaaggcttgattggtaat
gttgttcataatattacttacacatcaaagcagagatgggaagaatataaacaagattac
aatccaaacatgaatcatagtttcagtgacataaattctatggtttctaacaatggaata
gtgagtcccctaggccggagtttggaccaaaatagtgcaatctgcggcagaagctttgat
gtgtctttgattggccaattaaatggtggtgctctgtcaaacgctcagcacagtgagttt
gaaaattctgctgtggacgcaaaaataaagtccaatgaggactgcctcttggggcaaaca
aagtcacaggatggtttcattcaaaatggttatgagtctttggatgatataatgaatgca
atgatgaaacgggaacaaaatcagacagtgttgagcgatggggaatttggaataaatgct
tactctcttggatcatgtatatga
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