Castanea sativa (European chestnut): 142621996
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Entry
142621996 CDS
T11266
Name
(RefSeq) putative E3 ubiquitin-protein ligase RHA4A
KO
K19039
E3 ubiquitin-protein ligase ATL7/58/59 [EC:
2.3.2.27
]
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csaa04121
]
142621996
Enzymes [BR:
csaa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142621996
Ubiquitin system [BR:
csaa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
142621996
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_16
zf-ANAPC11
Prok-RING_1
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
142621996
NCBI-ProteinID:
XP_075651513
LinkDB
All DBs
Position
1:28893845..28896719
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AA seq
250 aa
AA seq
DB search
MGVPQTPNPPHLSPALQLKLYQAFIFSIPILFSIILLLLFYLFYLKRRASTLSYPPPILS
RSPIPASAYFTSPSQVGLKGEIKDKLPTILFDEELRTKESQCCVCLGEFEIKEELLQIPS
CKHVFHVECIRHWLHSNLTCPLCRCLVTPTKLDNPAAPPSISEPLQQASTPSNQRTQNES
SEQQLQQQQADRASSNLINIPIEHTTIAIEGSPSENTRIRESGSLPDLSNCRENEMAHSP
ESVVLHIRMQ
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttcctcaaactccaaatcctccacacctttctccggcacttcaacttaaactt
taccaagctttcatattctcaattcctatcctattttccattattctacttctcctgttt
tacttgttttacctcaagaggagagcttctactctctcatatcccccacctatactttca
agaagtcctattccagctagtgcatattttacctcaccttctcaagtgggcttgaagggg
gagatcaaggataagcttccaacaatcttgtttgatgaggaattaaggacaaaggaatca
caatgttgtgtctgcttgggagaattcgagatcaaagaagaattgcttcaaatcccatcg
tgcaaacatgtgtttcatgttgaatgcattcgtcactggctgcactcaaatttaacttgt
ccactttgtagatgcttggtcaccccaaccaaacttgacaatccagctgctccacctagt
atatccgagccccttcagcaagctagcacaccttccaaccagcgcacacagaatgaatca
tcagaacaacagctgcaacaacaacaagcagacagagcaagctcaaatctcattaacatt
ccaatagaacatacaacaatagctattgaaggatcgccgagtgagaatacacgaataagg
gaatccggcagcttacctgacttgtccaattgcagggagaatgagatggctcatagtcca
gaatcagtagttctccatatccgaatgcaataa
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