Castanea sativa (European chestnut): 142622002
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Entry
142622002 CDS
T11266
Name
(RefSeq) cyclic nucleotide-gated ion channel 18-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
142622002
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csaa04040
]
142622002
Ion channels [BR:
csaa04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
142622002
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ_SCN5A_C
IQ
UBM
Motif
Other DBs
NCBI-GeneID:
142622002
NCBI-ProteinID:
XP_075651517
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Position
1:complement(68480458..68485911)
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AA seq
705 aa
AA seq
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MNKIISNSTSKFRHFRRHSAAAAAATATDEPSNHYILWQYQILDPDSDIVTYWNQIFLVT
SLIALFIDPLYFYLPSVSGPACLSTDTSLSIAVTLFRSITDLFYLLHMIMKFRTAFVAPS
SRVFGRGELVMDAREIAVRYLKSDFIIDLAATLPIPQIIIWIVIPGTRHSRADHANNTLA
LFVLIQYIPRLFLIFPLNRRIIKTTGVVAKTAWAGAAYNLLLYMLASHVLGAVWYLSSIG
RQFSCWNAECARESRILSCLPSYLDCNSLQQSERQYWLNITHVLYNCDPKNEDINFKFGM
FAAAFTNDVASSRFIEKYLYCLWWGLRNLSSYGQTLETTTYLGETLFCIVLCIFGLVLFA
FFIGNMQTYLQSMTVRLEEWRIKKKDTEEWMRHRQLPPVLQERVLRFVEYKWFATRGVNE
ESILRSLPLDLRREIQRHLCLALVRRVLFFSQMDDQLLDAICERLVSSLNTQGTYIVREG
DPVNEMLFIIRGQLESSTTDGGRSGFFNSITLRPGDFCGEELLTWALMPNSSLNLPSSTR
TVRALTEVEAFALQAEDLKFVASQFKRLHSKRIQHAFRYYSHQWRTWGACLIQAAWRRYW
KKKEAKELARQESFYYMSIYDQDGNYNDELADGNYEDESGQRPSGDNARNAQHLGVTLLA
SKFAANTRRGANQKVLGGDPASTGLKMPQLFKPVEPDFSVDREDV
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaataatctccaattcaacctcaaagttccgccatttccggcgccactctgcc
gccgccgcagccgccaccgccacagacgaaccttcaaaccactacatcttatggcaatac
caaatcctcgacccagacagcgacatcgtcacctactggaaccaaatcttcctcgtcacc
tccctcattgctctcttcatcgaccctctctacttctacctcccctccgtcagcggcccc
gcctgcctctccaccgacaccagcttgagcatcgccgtcacgctctttcgctccatcaca
gatctcttctacctcctccacatgatcatgaagttcaggaccgcttttgtcgcccctagt
tcgagggttttcggccgcggcgagctcgtcatggacgctcgagagatcgccgtccggtac
ttgaagtccgatttcatcatcgatctcgctgccacactccctataccacagattatcatc
tggatagtaattccaggaacaagacactccagagctgatcatgccaacaacactctcgct
ctttttgttcttatacaatatattccgagactatttctcatcttccctttgaatcggcgt
attataaaaacgacaggggttgttgccaagactgcttgggcaggagctgcatacaatctt
cttctttacatgctagccagtcatgtattgggagctgtatggtatctatcatctataggg
aggcagttctcctgctggaatgccgagtgtgcaagggagtcacgaattctgagttgtctc
cctagttatttagattgtaatagtttgcaacaatctgaacgacaatactggctgaacatc
actcatgttctttataattgtgatccaaagaatgaagacatcaattttaagtttggaatg
tttgcagctgcttttactaatgatgttgcttcctcacgttttattgagaagtacttatat
tgtctttggtggggtttgagaaatctaagttcatatggacaaactttggagacgaccaca
tatcttggcgagacactattttgcattgttttatgcatctttggtttagttctgtttgca
ttttttattggcaacatgcagacttatttgcaatcgatgacagtacgacttgaagaatgg
aggattaagaaaaaagatacagaggagtggatgaggcatcgccagttacctccagttctg
caagaacgtgttcttcggtttgttgaatacaaatggtttgccacaagaggagttaatgaa
gaatccatactgcgttcattacccttggacctccgtcgtgaaattcaacgacatttatgt
cttgcactcgttcgtcgtgtcctattcttctcacaaatggatgaccagcttcttgatgcc
atatgtgaacgccttgtgtcatcactaaacacccaaggcacctacattgttcgagagggt
gatccagtaaatgagatgctgtttatcattaggggacaattggagagctccacaactgat
ggaggaaggtccgggttcttcaactctatcacccttagacctggtgacttctgtggtgag
gaattactgacatgggccttaatgccaaactctagtctaaacctgccttcttcaacccgg
actgttagagcccttactgaagttgaagcttttgcacttcaagccgaggaccttaagttt
gttgcaagtcagttcaagcgccttcacagcaagagaattcagcatgcattcaggtactac
tcccaccaatggaggacatggggtgcttgcttaatacaagcagcttggagaagatattgg
aagaaaaaggaggcaaaggaattggctagacaggagagcttctactatatgtcaatttat
gaccaagacggtaactacaatgatgagctagcagatgggaattatgaggatgagagtgga
cagagaccatcaggggacaatgcacgtaacgctcagcatcttggggtcacactcctggcc
tcaaagtttgctgcaaatacaagaagaggggctaaccagaaagttctggggggtgatcct
gcttctactggcttaaagatgccccaattatttaagcctgttgaacctgatttctctgta
gatcgagaggatgtttag
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