Castanea sativa (European chestnut): 142622010
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Entry
142622010 CDS
T11266
Name
(RefSeq) chaperone protein ClpB4, mitochondrial
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
csaa03110
]
142622010
Chaperones and folding catalysts [BR:
csaa03110
]
Heat shock proteins
HSP100
142622010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
Clp_N
ClpB_D2-small
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
AAA_14
IstB_IS21
Zeta_toxin
AAA_7
Mg_chelatase
AAA_18
AAA_28
TniB
NACHT
AAA_24
ABC_tran
Torsin
NBD_SMAX1
PduV-EutP
DUF2536
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
142622010
NCBI-ProteinID:
XP_075651531
LinkDB
All DBs
Position
1:complement(19650378..19660465)
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AA seq
979 aa
AA seq
DB search
MASRRASSRLSKSLIGATATATAPRLSHSHPRPLSSYILRNSLPSSSRPRVFGGGVSDSN
VASAKFLANTFTRHFHASTPSFYSASNGSQANPSEFTEMAWEGLVDAVNAARASKQQVVE
SEHLMKALLEQKDGLARRIFTKAGLDNTSVLQATDDFISKQPKVVGDTSGPIMGSYLTIL
LDNSHKHKKEMGDDFVSVEHLVLAFYSDKRFGKKLFSDLQLSEKDLKDAVSAVRGSQRVT
DQNPEGKYEALEKYGNDLTELARRGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGV
GKTAIAEGLAQRIVRGDVPEPLLNRKLISLDMGSLLAGAKFRGDFEERLKAVLKEVTASN
GQIVLFIDEIHTVVGAGATGGAMDAGNLLKPMLGRGELRCIGATTLNEYRKYIEKDPALE
RRFQQVFCDQPSVEDTISILRGLRERYELHHGVKISDSALVSAAVLADRYITGRFLPDKA
IDLVDEAAAKLKMEITSKPTELDEVDRAILKLEMEKLSLKNDTDKASKERLSKLENDLTS
LKQKQKELTEQWDREKALMTKIRSIKHEIDRVNLEMEAAEREYDLNRAAELKYGTLMSLQ
RQLEEAEKNLADFRKSGKSLLREEVTDLDIAEIVSKWTGIPLSNLQQSERDKLVHLEQVL
HKRVIGQDLAVKSVADAIRRSRAGLSDPNRPIASFMFMGPTGVGKTELAKALAGYLFNTE
NALVRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHHDV
FNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLSSSHDSKEAVYEMMKKQ
VVELARQTFRPEFMNRIDEYIVFQPLDSNEISKIVEIQLNRLKDRLKQKNIDLHYTKEAV
ELLGMLGFDPNFGARPVKRVIQQLVENEIAMGVLRGDFKEDDSVIVDASLSAKNIPPQNR
LRIKKLESSRVMDSMVAND
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcagaagagcttcttcaaggctgagcaagtcccttataggagccacagccaca
gccactgctcctcgactctcacactctcaccctcgcccactctcctcttatatccttcgt
aattctctaccctcttcgtctcgccctcgtgtttttggcggtggtgtatcggacagcaat
gtcgcttcggctaagtttctggccaacactttcacgcgccattttcatgcttccacaccc
tccttctactccgcctccaacgggtctcaggctaatccatcagagttcactgagatggca
tgggagggacttgttgacgctgtcaatgctgcacgggctagcaaacaacaagtggtggaa
tctgagcatttgatgaaagcccttctggagcaaaaggatgggttagccaggagaatattc
accaaggcaggacttgacaacacttcagttctgcaggctacagatgactttatatctaag
caaccaaaggtcgtgggtgacactagtggccctataatgggctcatatcttactatcctc
ttggacaattcccacaagcataagaaagaaatgggagatgattttgtgtcagtggagcat
cttgtgttggcattctattctgacaagaggtttggaaagaagttatttagtgacctccag
ctcagtgagaaggatttgaaggatgctgttagtgctgttcgcggaagtcagagagtaacc
gatcaaaatcctgaaggaaaatatgaggcgttggagaaatatgggaatgacttgacagaa
cttgcaaggcgaggcaaacttgatcctgttataggtcgagacgacgaaattcgccgttgt
atacagatattatctaggagaacaaaaaataatcctgttattattggtgaacctggtgtg
gggaagactgccattgctgaaggattagctcaacgaattgtacgaggggatgttcccgaa
ccactgttgaatcggaagttaatctccctagatatgggttcattgcttgctggtgccaag
tttcgtggagactttgaggaaaggttgaaagctgtcttgaaggaggtcactgcttcaaat
gggcagattgtcttattcattgatgagattcatactgttgttggtgcaggtgctacaggt
ggtgcaatggatgccgggaacttgttgaaaccgatgcttgggcgaggtgagcttcgatgt
ataggagcaactacattgaatgagtacagaaaatacattgagaaggatcctgcacttgaa
cgtagatttcaacaagtattctgtgatcaaccctctgttgaagacacaatatccattctt
cgtggattgcgagagcgatatgagctgcatcatggtgttaaaatatcagacagtgctctt
gtttcagcagcagttcttgcagatcgatacatcacaggacggtttttgccagataaagcc
attgatcttgttgatgaagccgctgcaaagctgaaaatggagatcacttcgaagcctaca
gagttggatgaagtagacagagctattctgaagttggagatggaaaagctctctcttaaa
aacgatactgataaagcatccaaagaaaggttaagcaaactggaaaatgatttaacttcg
cttaaacaaaaacagaaagaattaactgaacagtgggatcgtgagaaggctctcatgaca
aagataagatcaataaaacacgagattgatagagttaacctggagatggaagctgctgag
cgtgagtatgacctaaatcgtgcagctgaactcaaatatggaactctaatgtcccttcaa
cgccaattagaagaggcagagaagaatcttgctgacttccggaagtctggaaaatctttg
cttcgagaagaggtcactgatcttgatatcgctgagattgtaagcaaatggactggtata
cccttatcaaatcttcagcaatcagagagagacaaactagtccatctggaacaggttctt
cacaagagggtgattggtcaagatcttgcagttaaatcagttgcagatgctatccgacga
tcaagggcagggttgtctgacccaaatcggcccatagcgagtttcatgttcatgggccct
acaggtgttgggaaaacagagcttgcaaaggccttagctggttatctctttaacacggaa
aatgctcttgtcaggattgatatgagcgagtacatggagaagcatgcagtttcacgctta
gttggagcccctcctggttatgttggttatgaagaaggtggccagttaactgaggtggtt
cgtcgaaggccttattctgtagtactctttgatgaaatagagaaagcacatcatgatgtc
ttcaacattttgttacaattgttggatgatggaaggataactgattctcaaggacggact
gttagtttcacgaattgtgttgtgataatgacttcgaacattggctcccattatatactt
gagactcttagtagctcacacgatagcaaggaagcagtttacgaaatgatgaaaaaacaa
gttgttgaattggctagacaaactttccgtccagaattcatgaatcgaatcgatgagtat
attgtgttccagcccctggactccaatgaaataagtaaaatagtcgagatacagctgaat
cggttaaaagacaggctcaaacagaagaatattgatcttcattacactaaggaagctgtt
gagcttcttgggatgttgggctttgacccgaactttggagcgaggccagtgaagagggta
atacagcagttggttgagaatgaaattgcaatgggagttttgagaggagactttaaagag
gatgactcagttattgttgatgcgtctctgtcagccaaaaacattcctccccaaaacaga
ttgcggataaagaaactggagagcagccgtgtgatggattccatggttgctaatgactga
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