Castanea sativa (European chestnut): 142622082
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Entry
142622082 CDS
T11266
Name
(RefSeq) uncharacterized protein LOC142622082
KO
K15559
regulator of Ty1 transposition protein 103
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csaa03021
]
142622082
Transcription machinery [BR:
csaa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
142622082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
ALIX_LYPXL_bnd
LXG
Allexi_40kDa
CYP38_PsbQ-like
CTK3
P4Ha_N
Nuf2_DHR10-like
Motif
Other DBs
NCBI-GeneID:
142622082
NCBI-ProteinID:
XP_075651627
LinkDB
All DBs
Position
1:62375043..62384417
Genome browser
AA seq
522 aa
AA seq
DB search
MGSTFNPQILMEKLAKLNNSQASIETLSHWCIFHMNKAKQVVETWARQFHCSPREQRLAF
LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIENGDEFGRNAALRLVGIWEERKVFGS
RAQVLKEELVGRQLENSNRNGKSLNFKLRPPAGNKLEKIVSEYHIVYGGQSDEDVILSKC
RNAISSLEKAEKEISSDINSVGQFHGSAFVEELQGQHAVLRDCIEQLTAVESSRSSLVSR
LREALQEQEFKLDQVRNQLQAAQSQSEQAGNICQQFLNRDKVQSLAEQSPKEAQTSLAPH
SFVPGDREQSAPVMYTRQVSYPEKSGHIEEDPRKSAAAAVAAKLTASTSSVQMLSYVLSS
LASEGVIGNSMKESSNDYPPEKRPKLENDQSSYIPPPQNVQQPPVPPFPHPESIQHNVST
TSQQFAPNEPPPPPSSSPPPLPPLPPMPQYPVPQYMQTAGSISSVPYSYGMPQQQLPSMP
GYPPVSGISPFTTTNSYQSFQGSDGNIYNQPPSMPMAPISRQ
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtacattcaatccacagattttaatggaaaagctagccaagctcaacaattca
caggctagtatagagactttatcacattggtgtatattccatatgaataaagcaaaacaa
gttgttgaaacatgggctcggcagtttcactgttctccacgtgagcagagattggccttt
ctatatcttgcaaatgacatattgcagaacagtaggcgaaagggttcggagtttgttggt
gaattttggaaggttcttccagatgctcttcgtgatgtgattgaaaatggggatgagttt
ggaaggaatgctgcacttcgtctggttgggatatgggaagaaagaaaagtttttggttct
cgtgcacaagttcttaaggaagagcttgtgggtaggcaactggaaaatagtaatagaaat
ggaaagagtttgaacttcaaactgagaccgcctgctggaaataaattggaaaaaatagtt
tcagagtatcatatcgtttatggtggccagtcagatgaagatgttatattgagcaaatgt
aggaatgctattagcagccttgagaaagcagagaaggaaattagcagcgatattaattca
gttggacaattccatggatctgcatttgtggaggagctgcaggggcagcatgctgtactg
agggactgtattgaacaactaacggcagttgaatcatctagatcaagtcttgtgtctcgt
ttaagagaagctctccaggagcaggaatttaagctggatcaagtccgtaaccaacttcag
gccgcacagtcccagtcagagcaggcaggtaatatctgccaacagtttctaaatagagac
aaagttcagtcactagctgagcaaagcccaaaggaagctcaaacctccctagcacctcac
agctttgtaccgggagatagggaacaatcagctccagtaatgtacactcggcaggtttcc
tatcctgaaaaatctggccacattgaggaagacccacgcaagtctgctgccgctgcagtg
gcagcaaagctaactgcatcaacatcctctgtccagatgctctcttatgtcctatcctcc
cttgcatcagagggtgtcataggcaattcaatgaaagaatcctctaacgattaccctcct
gaaaagaggccaaaacttgaaaatgaccaatcctcttacataccaccacctcaaaatgtt
caacaacctccagttcctcctttccctcatcctgaatctatccaacacaatgtgtctacc
accagccaacaatttgcaccaaatgagccaccacctcccccctcatcgtctcctccacca
ctgccaccactaccacctatgccacagtatccagtgccccagtacatgcagactgctgga
tcaataagtagtgtaccatacagctatggcatgccccaacagcagctgccttcaatgcct
ggttatcctccagtgtctgggatttctccctttacaactacaaattcttaccaaagtttt
cagggttctgatggcaatatttataaccagccaccgtccatgccaatggctcctatttct
cgacaatag
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