KEGG   Castanea sativa (European chestnut): 142622178
Entry
142622178         CDS       T11266                                 
Name
(RefSeq) histone deacetylase 19-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa03082  ATP-dependent chromatin remodeling
csaa03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    142622178
   03083 Polycomb repressive complex
    142622178
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csaa03036]
    142622178
Enzymes [BR:csaa01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     142622178
Chromosome and associated proteins [BR:csaa03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     142622178
   HDAC complexes
    Sin3A-HDAC complex
     142622178
    BRAF-HDAC complex
     142622178
    REST complex
     142622178
    SHIP complex
     142622178
    MiDAC complex
     142622178
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     142622178
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    142622178
  Chromatin remodeling factors
   NuRD complex
    142622178
SSDB
Motif
Pfam: Hist_deacetyl GP67
Other DBs
NCBI-GeneID: 142622178
NCBI-ProteinID: XP_075651725
LinkDB
Position
1:16627433..16633993
AA seq 474 aa
METGGNSLPSGPDGVKRKVSYFYDPEVGNYYYGQGHAMKPHRIRMTHALLAHYGLLQHMQ
VLKPTPARDRDLCKFHADDYVNFLRAITPETQQDQLRLLKRFNVGEDCPVFDGLYAFCQT
YAGGSVGGAVKLNQGSCDIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLKVHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYGKGKYYSLNVPLDDGI
DDESYQSLFKPIIGKVMEVYRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRFIRSFN
VPLLLVGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYYEYFGPDYNLHVAPSNMEN
KNSRQLLDEIRERLLDYLSKLQHAPSAQFQERPPDTQLLEDDEDQDDGDARWDPDSDMDS
DDDRKPLPGRVKREYVESEPKNLAPTMMAIDEPSIKVEQDNSNKSSDQHTDMNS
NT seq 1425 nt   +upstreamnt  +downstreamnt
atggaaacgggaggcaattcccttccgtctggccctgatggggtgaagaggaaagtgtca
tatttctatgacccggaagttggaaattattattatggacaaggtcatgcaatgaagcct
cataggattcgaatgacacatgctcttttagcccactatggattgcttcaacatatgcag
gtcttgaagcccactcctgctagagatagggatctttgcaagttccacgctgatgattat
gtgaattttcttagagccatcaccccggagacgcagcaagatcagctgaggctgctaaag
aggtttaatgttggtgaagactgcccggtatttgatggtctttacgcattctgtcagact
tatgctgggggttcagttggtggtgctgttaaattgaatcaaggaagctgtgatattgcg
ataaactgggctggtgggttgcatcatgccaaaaagtgtgaggcttctggattctgctat
gtgaatgatattgtcttgggaattctggagcttctcaaagtacatgagcgtgttttgtat
gtagacattgatatccaccatggcgatggtgtagaggaggctttttacacaactgataga
gtcatgactgtttcatttcataaatttggagactatttccctggtacgggcgatattcgt
gatattggatatggaaaagggaaatattattctcttaatgttcccctagatgatggtatt
gatgatgagagctaccagtcactgtttaagccaataatagggaaagtgatggaagtttac
aggcctggtgctgtggtcctacagtgtggtgcagactctttgtctggtgacagattaggg
tgttttaatctatcaattaaaggccatgcagagtgtgttagatttattagatctttcaat
gttccgcttttattggtgggtggaggtggttatacaatacgaaatgttgctcgttgctgg
tgttatgagacaggtgttgctcttgggattgaagttgatgataagatgccacaacatgag
tattacgagtactttggtccagactataatcttcatgtagctccaagtaacatggaaaac
aagaactcccgtcaattattggatgagataagagaaagactccttgattatctatctaag
ctgcaacatgcaccaagtgcccagttccaagagcgcccacctgatacacagcttctcgag
gatgatgaagatcaagatgatggagatgctagatgggatcctgattctgacatggattct
gatgatgaccgtaaacctttgccaggtcgagtaaaaagagaatacgtcgaatctgaacct
aaaaatttggcaccaactatgatggcaatagatgagccatccatcaaagtggagcaggat
aactcgaacaaatcatcggatcaacacactgatatgaactcatga

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