KEGG   Castanea sativa (European chestnut): 142622184
Entry
142622184         CDS       T11266                                 
Name
(RefSeq) uncharacterized protein LOC142622184
  KO
K11790  denticleless
Organism
csaa  Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csaa04121]
    142622184
Ubiquitin system [BR:csaa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     142622184
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_IFT122_1st Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR3_2nd WDR55 Beta-prop_TEP1_2nd DSE1_N Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin EIF3I Beta-prop_NOL10_N Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR41 ASA1 Beta-prop_DCAF4 Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 TRM82_WD Beta-prop_SCAP Beta-prop_SPT8 MIOS_WD40 WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 142622184
NCBI-ProteinID: XP_075651731
LinkDB
Position
1:66421348..66426909
AA seq 510 aa
MQTSNSHSFFHDLRSRELNGFRVRKRAHISDVASGINEIGAVAVEHRGEETPPLAISFCK
TSKNSHILAVSDEDGYVSLFDTHRKLSSSSSHQENADKARVCDWVAHHNAVFDLCWIKED
TQILTASGDQTMKVWDVQERKCIGVLSGHTGSVKSMCSHPSNPDIIVSGSRDGSFALWDL
RCNFSSKSWNRELCIGSTAMVKRAHLSPQAKRIRRSKAASMSITSVLYLKDEVSIASAGA
VDSILKFWDTRNLKSVVTQTSPHPQSTAKERRLHGISSLSQDLNGVFLSASCMDNRIYLY
NVLQLEKGPLRSFSGCRIESFFVKSAISPDAAHIISGSSDGCAYLWQVNKPQEDPLKLES
HDGEVTAVDWCSFEVGKMATSSDDFTVRIWNTQSSYCSSTRSPSSIRRRVMAIPSAECNK
LMNNESSCLTKDPDSLFPSNEVLVQSSSSNTISMPTISTPESQKKKLFSGSDLNEAFEKT
PEATLKSPSSVLNPPSSIKRTIRDYFLVAS
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgcagacctcaaactcacactccttctttcacgacctcagatccagagagctcaacggt
ttcagagttcgaaaacgagctcacataagcgacgtcgcatcgggcatcaatgagatcgga
gcggtggcggtggagcatcgcggcgaggagacaccgccattggctatctcattctgcaag
accagtaagaactcgcatatccttgcggtttccgacgaggacgggtacgtgagcttgttc
gatactcaccgcaagttatcatcttcttcatcccatcaagaaaatgcagacaaagctagg
gtttgtgattgggttgcgcaccataatgcggtgttcgatttatgttggattaaggaagac
actcaaattctgacagcttctggtgatcaaactatgaaggtatgggatgtccaggaaagg
aaatgtattggagtgttgtcggggcacactggaagtgtgaagtctatgtgttctcatcca
agtaatccagatattattgtctctggttcaagggatgggtcctttgctctttgggacctg
agatgcaattttagttccaaaagttggaatagggaactttgtataggttcaactgccatg
gtaaaaagagcacatctttcccctcaagcaaaacgcatcaggcggagcaaggcagcttct
atgagcattacatcggtcctttatctcaaagatgaggtttccattgcttctgcgggagca
gtggacagcattttgaagttctgggataccagaaatctgaaaagtgtggtcacacagaca
agtcctcacccccagtcaactgcaaaggaaagaagattacatggtatatctagcttgtcc
caagatttaaatggagtgtttctttcagcttcatgcatggacaatagaatatacttgtac
aatgtacttcagcttgaaaaggggcctttgagatcattctctggatgcaggatagaatct
ttttttgtaaagtcagcaatcagccctgatgcagctcacataatcagtggttctagtgat
ggatgtgcctatctttggcaggtgaacaagcctcaagaagatcccctaaaattggaaagc
catgatggagaagttacagcagtagattggtgttcttttgaggttgggaagatggcaact
tcttcagatgatttcacggttcgaatttggaacacacagagcagttattgctcgagcaca
agatccccatcttccattcgaaggagagtaatggcaatccctagtgcagaatgtaacaag
cttatgaataatgaatcaagttgtcttacaaaggatcctgacagtttatttccttccaat
gaggtattagtccaaagtagctcatccaacacaatctcgatgcccacaatcagtactcct
gagagccagaagaagaagttattctcaggttctgatttaaatgaagcctttgagaaaacc
ccagaagctacattgaagagcccatcttctgttttgaaccctccttcctccataaaaaga
acaatccgagattactttttagtggcttcataa

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