KEGG   Castanea sativa (European chestnut): 142622203
Entry
142622203         CDS       T11266                                 
Name
(RefSeq) uncharacterized protein LOC142622203
  KO
K03873  elongin-B
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    142622203
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csaa04121]
    142622203
   03400 DNA repair and recombination proteins [BR:csaa03400]
    142622203
Ubiquitin system [BR:csaa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     142622203
   Cul5 complex
     142622203
DNA repair and recombination proteins [BR:csaa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     142622203
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Dsc3_N Ubiquitin_2 UBL_UBAC1 Rad60-SLD_2 UN_NPL4
Other DBs
NCBI-GeneID: 142622203
NCBI-ProteinID: XP_075651759
LinkDB
Position
1
AA seq 103 aa
MAMYIRVKRSKTTYFIRCDPTETVLDIKEKLQVLIDQPVNNQRLILVGTGEVLEDSKTLA
DHKVENDSVVALTLRKDDNEFEEVDIVQPNDFYQSRDADTGNW
NT seq 312 nt   +upstreamnt  +downstreamnt
atggctatgtatatccgtgttaagcgtagtaagacaacttacttcatacggtgtgatcct
actgaaacagttctagacataaaagagaaattgcaagtcctcatcgatcaaccagttaat
aatcagcgtttgatcctagttggtactggggaagttttagaggattcaaagacattggca
gatcataaggttgaaaatgattcagttgtggcactgaccttgagaaaagatgataatgag
ttcgaggaggtagacattgtgcagccaaatgatttttaccaatcacgggatgcagacact
ggcaattggtaa

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